PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000522.1_g080.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | C3H | ||||||||
Protein Properties | Length: 172aa MW: 18734.3 Da PI: 4.9412 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 19.5 | 1.7e-06 | 117 | 133 | 9 | 26 |
GGGTS--TTTTT-SS-SS CS zf-CCCH 9 fartGtCkyGdrCkFaHg 26 fa G+Ck+ + CkF H+ Pav_sc0000522.1_g080.1.mk 117 FAM-GICKFEPACKFDHP 133 555.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MLPAARLLLP VSVSALYALY ALYKYLRSGR VTELSEDIAV PLNPDNNDVV SRQPSHLDPA 60 ILEEIRKFDP AVLDEFRKFD PALLDELGLV SLAPIASLIT LVEGKPIRIR TFAHITFAMG 120 ICKFEPACKF DHPLNITSST TSGPDHQHSF SDSATTNGAG SDTDATSQPQ PM |