PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000506.1_g170.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | BES1 | ||||||||
Protein Properties | Length: 323aa MW: 34505.5 Da PI: 8.6522 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 218.9 | 1.1e-67 | 3 | 146 | 1 | 150 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaags 84 ++++r+ptwkErEnnk+RERrRRaiaakiy+GLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp ++++++g Pav_sc0000506.1_g170.1.mk 3 TSGTRMPTWKERENNKKRERRRRAIAAKIYSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVDRMDIMGG 86 5899******************************************************************************** PP DUF822 85 sasaspesslqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150 s+sasp+ss+q +sp++sy++sp+sssfpsp+++ + + +a +sl+p+l++ls+ sss+ Pav_sc0000506.1_g170.1.mk 87 STSASPCSSYQ--------PSPCQSYNPSPASSSFPSPARYPANANGNAdaNSLIPWLKTLSSGSSSA 146 ***********........*********************99887665566**********9977765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence |
MMTSGTRMPT WKERENNKKR ERRRRAIAAK IYSGLRMYGN YKLPKHCDNN EVLKALCNEA 60 GWTVEEDGTT YRKGCKPVDR MDIMGGSTSA SPCSSYQPSP CQSYNPSPAS SSFPSPARYP 120 ANANGNADAN SLIPWLKTLS SGSSSATSKL PQLFIQGGSI SAPVTPPLSS PTSRTPRTKS 180 DWDEAVAGSN WAGQNYPFLP SSTPPSPGRQ VLPDSGWLAG LQIPQSGPSS PTFSLVSRNP 240 FNLKEALSGG GSRMWTPGQS GTCSPVVAAS VDHSGDVPMS DGMAAEFAFG SNTSGLVKPW 300 EGERIEECVS DDLELTLGSA RTR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18890.1 | 7e-92 | BES1 family protein |