PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000503.1_g740.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ARR-B | ||||||||
Protein Properties | Length: 708aa MW: 77329.7 Da PI: 5.1189 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 73 | 4.3e-23 | 183 | 236 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k +++Wt++L +rF+eav + G ekA+Pk+ile+m+v+gLt+++++SHLQkYR+ Pav_sc0000503.1_g740.1.mk 183 KHKVEWTSQLQARFLEAVYCI-GLEKAVPKRILEVMNVEGLTRANIASHLQKYRM 236 6799*****************.********************************7 PP | |||||||
2 | Myb_DNA-binding | 23.8 | 1.1e-07 | 186 | 235 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT +++ ++++av G + +k+I + m+ +g+t+ ++ s++qky+ Pav_sc0000503.1_g740.1.mk 186 VEWTSQLQARFLEAVYCIGLEkaVPKRILEVMNvEGLTRANIASHLQKYR 235 68*****************99****************************7 PP | |||||||
3 | Response_reg | 37.2 | 1.6e-13 | 27 | 120 | 1 | 102 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH...HHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealell...kekdpDlillDiempgmdGlellkeireeepklpiivvtahg 81 vl+vdD+ ++ + +l+ + ev +++++ al ++ +e ++Dli+ D+ +p++ Gl++++++ree+ klp Pav_sc0000503.1_g740.1.mk 27 VLVVDDDAEFLTFISGLLKLLKH-EVVTMRNPIHALSTTlllEEDKFDLIMADLYLPNVAGLQVIRRLREES-KLP-------- 100 89*****************9999.8899999999988766668888************************98.443........ PP THHHHHHHHHTTESEEEESS- CS Response_reg 82 eeedalealkaGakdflsKpf 102 e+++l+al+ Ga +++Kp+ Pav_sc0000503.1_g740.1.mk 101 -ESTILAALEHGATHYIVKPV 120 .67777888888888888876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 708 aa Download sequence |
MYGDKSLQGS QSDLIMNTSS YPKKLRVLVV DDDAEFLTFI SGLLKLLKHE VVTMRNPIHA 60 LSTTLLLEED KFDLIMADLY LPNVAGLQVI RRLREESKLP ESTILAALEH GATHYIVKPV 120 CFSDVRNLWQ FVVGGNEGTR NPHIVVEQIG SVSGESSSSS NGDSNSKRKR PSQGGKDFTS 180 IKKHKVEWTS QLQARFLEAV YCIGLEKAVP KRILEVMNVE GLTRANIASH LQKYRMFLRK 240 VAGRIAVSKL SMDLSQHTRR SLLNQNIPGK KPTTPDEPIS LRDNFELSVK PNASNLSLLG 300 RRPNDQEATS SGSPPQSGYI TGHPYLPYAA SKFANLPLMS STPNALQPAA NCSGFQSNNA 360 QGNLSTTNPS PKLISTDIPY SFGRNSANGV HIGTNLVHMY QQKAQETPQP FTTTGNGNSN 420 NASWNNSNVM TSYTNNSYGT GMQMTITSSD GGGRLAGQMA PTQTVFNNVG WDSNGVNNNC 480 GDLLINNGTQ NDDQNRNVLQ VENVVFGYDF PQKESSSSHG FSGSRCSQFS PILAEGNNAG 540 QGNVNVSELD QIVQQCSALF SSSNNSSQVT VVDSSSSSTE ISSSYQKDND DAFDLSVLLF 600 NELHLESINN DQVKRKQAMD SAKDTDDDFD LFLNENHFGN VNDDDKGKGK QVMNFDPSAS 660 VVQESSPLNK ESLAQFDGDG DGDGLNMASP ENLSLDEDWE NIVESLFK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 8e-37 | ARR-B family protein |