PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000502.1_g710.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 204aa MW: 23309.2 Da PI: 8.6592 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 75.8 | 3.2e-24 | 9 | 57 | 1 | 49 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 k+ien rqvtf+kRr+g+lKKA+ELSvLCda++ + ifss+gkl+e Pav_sc0000502.1_g710.1.mk 9 KKIENPVHRQVTFCKRRAGLLKKAKELSVLCDADIGIFIFSSHGKLFEL 57 68********************************************996 PP | |||||||
2 | K-box | 60.3 | 8e-21 | 84 | 174 | 9 | 99 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenk 92 + e+++ ++e++ Lk+eie Lq+ +R + G + e+++l eLq Le++Le + ++Rs K+++l+++i+ l++ e l +nk Pav_sc0000502.1_g710.1.mk 84 AIETQTLDAKKEINLLKQEIEILQKGLRYMFGGGAETMTLDELQVLEKHLEVWIYHVRSAKMDVLFREIQLLRNSEGILTAANK 167 4567777899************************************************************************** PP K-box 93 aLrkkle 99 +L+ k+ Pav_sc0000502.1_g710.1.mk 168 YLQDKII 174 ****986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MARGKVQMKK IENPVHRQVT FCKRRAGLLK KAKELSVLCD ADIGIFIFSS HGKLFELATK 60 GNMQGLIERY MKMKPTRVSQ ADQAIETQTL DAKKEINLLK QEIEILQKGL RYMFGGGAET 120 MTLDELQVLE KHLEVWIYHV RSAKMDVLFR EIQLLRNSEG ILTAANKYLQ DKIIEENIGV 180 TNITPMASDN PYPLTIPDDD IFQI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71692.1 | 9e-79 | MIKC_MADS family protein |