PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000502.1_g210.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 593aa MW: 68709.1 Da PI: 7.4705

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000502.1_g210.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.2	1.2e-22	50	137	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklele 84 Yn+YA++vGFsvrk +++++ +++ + + Cskeg+r +++ + e ++ ++ etrtgC+a+++ ++ d++w+v++++ e Pav_sc0000502.1_g210.1.br 50 LYNNYATRVGFSVRKGQKRYN-TKKVLRQFSYLCSKEGFRLDSDPS-ELSKVSKLETRTGCEASIRFAFQDeDDTWKVSHFVPE 131 7**************9998.66779999********9999.99999************9999******** PP FAR1 85 HnHela 90 HnHela Pav_sc0000502.1_g210.1.br 132 HNHELA 137 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 593 aa Download sequence
MLWVVSVFID VESDEENVRE KDPMIVNRVE NIDEDLLGRV VSTEEEAYNL YNNYATRVGF 60 SVRKGQKRYN TKKVLRQFSY LCSKEGFRLD SDPSELSKVS KLETRTGCEA SIRFAFQDED 120 DTWKVSHFVP EHNHELAKPE ERQFLRSNRK VSDSNLGVIK TMVGAGIRTT NTYSYLAEEV 180 GGSQNVGFTK RDCYNVVNKE KMAMIEAGDA QSLMNLFKRK QAEDPMFFYT VQVDQENRMT 240 NFFWRDGRSR IDYDCFGDVV VFDTTYRTNR YNMICAPFVG VNHHWKNVLF GCAFLLDEKT 300 DSFIWLFETF LESMGGRKPK TIFTDQCQAM ANGIQNVFPG VCHRLCSWHI SQNAARNLGS 360 YYGNQEFNHM FNKCLQGYCE TELEFQSIWD DLLAKFNLTG NPWLMTLYNL RAKWCPVFSR 420 HIFTARIKSS QRSESTNNVF HQMSTKTMSL TQFVHHYDKQ AEKMRSSELE ESFRCNQGLP 480 SRIAKSSGIL NHAATVYTRK IFKLFEKEFV DSLAVMMHEV GSDSTIHSFQ LNEEGHNRVY 540 LVELNSFNCT ISCSCKMFES MGLLCRHALR VLNLKILKET NKIIVGIDTQ VCK

Sequence ? help Back to Top

Protein Sequence Length: 593 aa Download sequence

MLWVVSVFID VESDEENVRE KDPMIVNRVE NIDEDLLGRV VSTEEEAYNL YNNYATRVGF  60
SVRKGQKRYN TKKVLRQFSY LCSKEGFRLD SDPSELSKVS KLETRTGCEA SIRFAFQDED  120
DTWKVSHFVP EHNHELAKPE ERQFLRSNRK VSDSNLGVIK TMVGAGIRTT NTYSYLAEEV  180
GGSQNVGFTK RDCYNVVNKE KMAMIEAGDA QSLMNLFKRK QAEDPMFFYT VQVDQENRMT  240
NFFWRDGRSR IDYDCFGDVV VFDTTYRTNR YNMICAPFVG VNHHWKNVLF GCAFLLDEKT  300
DSFIWLFETF LESMGGRKPK TIFTDQCQAM ANGIQNVFPG VCHRLCSWHI SQNAARNLGS  360
YYGNQEFNHM FNKCLQGYCE TELEFQSIWD DLLAKFNLTG NPWLMTLYNL RAKWCPVFSR  420
HIFTARIKSS QRSESTNNVF HQMSTKTMSL TQFVHHYDKQ AEKMRSSELE ESFRCNQGLP  480
SRIAKSSGIL NHAATVYTRK IFKLFEKEFV DSLAVMMHEV GSDSTIHSFQ LNEEGHNRVY  540
LVELNSFNCT ISCSCKMFES MGLLCRHALR VLNLKILKET NKIIVGIDTQ VCK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-113	FAR1 family protein