PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000500.1_g230.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 292aa    MW: 32229.8 Da    PI: 5.709
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000500.1_g230.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.64.2e-18962150
                        NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....k 50
                               +ppGfrFhPtdeel+++yLkkkv+ +k+++ evi+evd++k+ePw+L+      +
  Pav_sc0000500.1_g230.1.mk  9 VPPGFRFHPTDEELLHYYLKKKVSFQKFDM-EVIREVDLNKMEPWELQDgwvicR 62
                               69****************************.99**************84344441 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MANSSTGGVP PGFRFHPTDE ELLHYYLKKK VSFQKFDMEV IREVDLNKME PWELQDGWVI  60
CRVFKKKNLF KVGNEGGSSS MNSSDHQQLN NTSSTNQARS FMHTHRDNQY LLRQQHSQAF  120
ELNNPNLHYA HLQPPPQYSL FQPQALIATH KPLAGYDYTQ LPSDDSPGHG MVKQLMTNPR  180
DCESGSENLR YQGCEPGLEV GTCEPNQAPM VAGGGGSDAL IATHKPLAGY DYTQLPSDDS  240
PGHGMVKQLM TNPRDCESGS ENLRYQGCEP GLEVGTCEPN QAPMVAGGGG SD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G10350.17e-29NAC family protein