PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000491.1_g500.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 208aa MW: 23408 Da PI: 3.8315 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.7 | 2.6e-08 | 40 | 70 | 1 | 31 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartm 31 +g+WT eEd l d+++ +G g+W++ a + Pav_sc0000491.1_g500.1.mk 40 KGPWTVEEDSVLFDYINIHGEGRWNSLAGHA 70 79************************99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MDMADVHVHD HVRAGYGSSA ASAETHDQIP SEEEDVDLRK GPWTVEEDSV LFDYINIHGE 60 GRWNSLAGHA DAMRYVWIPR LIERIQALPQ SLPGQSSHES TDLTTASESQ YWIDSNFMPE 120 TSGSSSSESS DQLQVCSIPD PTTTDQFMNY PSTNQYGSDN QNGTNSDFLG FEQSNYWSSS 180 GGDLSVENLW NEENIWFLQQ QLSDDQWN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49620.1 | 4e-13 | MYB family protein |