PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000481.1_g070.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NF-YA | ||||||||
Protein Properties | Length: 111aa MW: 12327.7 Da PI: 10.4099 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 105.3 | 5.3e-33 | 16 | 72 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep++VNaKQy++Il+RRq+Rak+e+e+k ksrkpylheSRh+hAlrR+Rg+gGrF Pav_sc0000481.1_g070.1.mk 16 EEPVFVNAKQYHGILRRRQSRAKAESENKA-LKSRKPYLHESRHQHALRRARGCGGRF 72 69***************************9.9*************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 111 aa Download sequence |
MGIQQAGVPL PSDAVEEPVF VNAKQYHGIL RRRQSRAKAE SENKALKSRK PYLHESRHQH 60 ALRRARGCGG RFLNAKKNDN QQDEMSSGDK SQPNINLNSD KSELASSDGT S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.1 | 1e-54 | NF-YA family protein |