PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000480.1_g470.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 478aa MW: 54646.7 Da PI: 9.4119

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000480.1_g470.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.5	1.5e-08	338	386	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +l+++v q G g+W+ r + +Rt+ ++k++w+++l Pav_sc0000480.1_g470.1.mk 338 SWTSSEVMKLIEGVSQCGVGRWSEMKRLLFsscSHRTAVDIKDKWRNLL 386 6*********************888887***************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MASWGAKHSD KVFKSEGGPD SCLQNAGLES HSPGVYKEYC GAEISDLSCE STPRLGYKDN 60 RSSLLLDHMS VQERQLAFRN MFRHETPVMD KQWPKHSTSP GLQNFFELES RSNLAECGLM 120 SKKNEGKTVL SSSIEFFGRD SGTIKGSLSD ESMSRDLLVK RKKLADHESL KTSNSRVSEI 180 ELCSSDERDK AGAFAMQKRS RRPPRRYIEE LAESKSKFYS RKCGVACKRS KNSFLHVRSD 240 KNNRQKETQE ETLLCQDKSY EVGCIQVPFG LPVETGQLEE HNSSLNSEDC KDHRLLRSSE 300 KLEIEYSAAK SREEISEDEC VLRRSTQKGS KQIKHYTSWT SSEVMKLIEG VSQCGVGRWS 360 EMKRLLFSSC SHRTAVDIKD KWRNLLKASC TQLQKERKIK RDISKQASDH VPESVLQRVR 420 ELAVIYPYPR RKRTLRIART RLPGSSEKLE IEYSLAKSRE EISEDESVSR RNTQKVSK

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MASWGAKHSD KVFKSEGGPD SCLQNAGLES HSPGVYKEYC GAEISDLSCE STPRLGYKDN  60
RSSLLLDHMS VQERQLAFRN MFRHETPVMD KQWPKHSTSP GLQNFFELES RSNLAECGLM  120
SKKNEGKTVL SSSIEFFGRD SGTIKGSLSD ESMSRDLLVK RKKLADHESL KTSNSRVSEI  180
ELCSSDERDK AGAFAMQKRS RRPPRRYIEE LAESKSKFYS RKCGVACKRS KNSFLHVRSD  240
KNNRQKETQE ETLLCQDKSY EVGCIQVPFG LPVETGQLEE HNSSLNSEDC KDHRLLRSSE  300
KLEIEYSAAK SREEISEDEC VLRRSTQKGS KQIKHYTSWT SSEVMKLIEG VSQCGVGRWS  360
EMKRLLFSSC SHRTAVDIKD KWRNLLKASC TQLQKERKIK RDISKQASDH VPESVLQRVR  420
ELAVIYPYPR RKRTLRIART RLPGSSEKLE IEYSLAKSRE EISEDESVSR RNTQKVSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	2e-24	MYB_related family protein