PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000480.1_g340.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 811aa MW: 88866.6 Da PI: 7.3564

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000480.1_g340.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.6e-09	625	662	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gL+ +qV++WF N R + Pav_sc0000480.1_g340.1.mk 625 FEHflHPYPTDTDKHMLATQTGLSRNQVSNWFINARVR 662 664459******************************87 PP
2	BELL	109.4	2.1e-35	474	542	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e q+kkakLl ++eeV++rYkqy++q+q+v+ssFe vagl sa+pY+s+Al+++SrhFrcL +ai++++ Pav_sc0000480.1_g340.1.mk 474 EYQQKKAKLLYMQEEVCRRYKQYNQQMQMVVSSFESVAGLSSATPYISMALNTVSRHFRCLTNAIKDHL 542 789**************************************************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 811 aa Download sequence
MEMSGFRPEL HVAQQSRRDK LRVHQTSSPP HHLDSEKLPL HPGLNPDIVQ VRNVRNANLL 60 YDPTVFSSEM LNFSINANAL SGQGSGESEN FGNWRSLNPP QSLDWVTNYT SGSVGSGSNN 120 QNHMFGSREA NTNVSPSAPH LLKPSSFHGY QDVQSSLANQ SAEISIHHVS QKHLGTMHFS 180 SPPLNYLNTL QDVVTSASTG GQDQLQMASL VQQRIMENEL VLLPSYGNQS NTLRFDNASS 240 NSWMDRQPVE NRHHWSSGGM GFSTAKNVDE DMRNGMSNDS NQQGLSLSLS SNPPSNNKLP 300 AAQFGSQDLH ASSHDDHAFK DVQSPKTGKS SADYLCSITK PSIISKACGK SLQDIVGTST 360 SACRSNGPLG PFTGYATILK SSKFLKPAQQ LLDEFCRNSD SKLTKTREAS ERMSGDVSAS 420 ASVSVSTDAA NAVETEAVAK GNNSGASSST FYGSNEITSD GGAASISSGS FGPEYQQKKA 480 KLLYMQEEVC RRYKQYNQQM QMVVSSFESV AGLSSATPYI SMALNTVSRH FRCLTNAIKD 540 HLKHIRKALG EEYLSSAITT GTTGCSSSKG DKNLAKLKFM GLGFQKHNTS GGGAHLGFSE 600 PQQHVWRPQR GLPERSVAIL RAWLFEHFLH PYPTDTDKHM LATQTGLSRN QVSNWFINAR 660 VRVWKPMVEE IHMLETRGGS VEASQDPTKK DGNSLTEGTS SRPDNEHQLG INNMMHDRQL 720 ECSGDEEQQY QEIKRSRIEC QVPSSMDGGL MGFVPYQRSG LEVGGLGAVS LTLGLRHGVE 780 SAQQQQQQQL QQQEDQLRRQ LGSQMIRDFV G

Sequence ? help Back to Top

Protein Sequence Length: 811 aa Download sequence

MEMSGFRPEL HVAQQSRRDK LRVHQTSSPP HHLDSEKLPL HPGLNPDIVQ VRNVRNANLL  60
YDPTVFSSEM LNFSINANAL SGQGSGESEN FGNWRSLNPP QSLDWVTNYT SGSVGSGSNN  120
QNHMFGSREA NTNVSPSAPH LLKPSSFHGY QDVQSSLANQ SAEISIHHVS QKHLGTMHFS  180
SPPLNYLNTL QDVVTSASTG GQDQLQMASL VQQRIMENEL VLLPSYGNQS NTLRFDNASS  240
NSWMDRQPVE NRHHWSSGGM GFSTAKNVDE DMRNGMSNDS NQQGLSLSLS SNPPSNNKLP  300
AAQFGSQDLH ASSHDDHAFK DVQSPKTGKS SADYLCSITK PSIISKACGK SLQDIVGTST  360
SACRSNGPLG PFTGYATILK SSKFLKPAQQ LLDEFCRNSD SKLTKTREAS ERMSGDVSAS  420
ASVSVSTDAA NAVETEAVAK GNNSGASSST FYGSNEITSD GGAASISSGS FGPEYQQKKA  480
KLLYMQEEVC RRYKQYNQQM QMVVSSFESV AGLSSATPYI SMALNTVSRH FRCLTNAIKD  540
HLKHIRKALG EEYLSSAITT GTTGCSSSKG DKNLAKLKFM GLGFQKHNTS GGGAHLGFSE  600
PQQHVWRPQR GLPERSVAIL RAWLFEHFLH PYPTDTDKHM LATQTGLSRN QVSNWFINAR  660
VRVWKPMVEE IHMLETRGGS VEASQDPTKK DGNSLTEGTS SRPDNEHQLG INNMMHDRQL  720
ECSGDEEQQY QEIKRSRIEC QVPSSMDGGL MGFVPYQRSG LEVGGLGAVS LTLGLRHGVE  780
SAQQQQQQQL QQQEDQLRRQ LGSQMIRDFV G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	3e-91	TALE family protein