PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000467.1_g1040.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 154aa MW: 17369.4 Da PI: 11.0283 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.1 | 2.1e-10 | 19 | 62 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + Er+RR r+++++ Lr l+P+ +K++Ka+i+ A +Y+++Lq Pav_sc0000467.1_g1040.1.mk 19 ISERKRRGRMKEKLYALRALVPNI-----TKMDKASIVGDASQYMQELQ 62 57*********************7.....7******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence |
MTTTTTKRGK NIDKSRTLIS ERKRRGRMKE KLYALRALVP NITKMDKASI VGDASQYMQE 60 LQMQAKKLKY QGYNNIGNTG KIRMANTSLL VSKKIIQERG FYVKLVCNKV QGVAASLYMV 120 LESLIVFNVQ NSNLATASES LVHTVTLKRA TKHN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28160.1 | 4e-48 | bHLH family protein |