PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000465.1_g450.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 268aa    MW: 29144.1 Da    PI: 4.6168
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000465.1_g450.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.31.5e-0733542446
                               HHHHHHHHTTTS-HHHHHHHHHH CS
            Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqk 46
                               W+ Ia++++ gRt++++k++w++
  Pav_sc0000465.1_g450.1.mk 33 WSQIAARLP-GRTDNEIKNFWNS 54
                               *********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MRKPEPSAAA AAAAKSNNNN SNNTSKLRKG LWWSQIAARL PGRTDNEIKN FWNSTIKKRL  60
KNLSSSNASP NTSDSSSEPK DHHAMLAGGF IPGQEHGMMP LYMDSSPSLM QSTVLNHMFD  120
PLPMLDHAGL TLPGGAGGYY NSTPCTTQIN GVGGDCCFGD NGVFGVGGGV DIGVEGEIFV  180
PALECVSAED QNLKTEPIYD HRNTTHNNYY NNINSITSTN YNNNIKVENI GAGNYYDDQE  240
ELTMGEWDLE DLMKDVSSAS FPFLDYQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08500.14e-17MYB family protein