PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000464.1_g790.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 290aa    MW: 32494 Da    PI: 6.7918
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000464.1_g790.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH291.9e-09203246755
                                HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                        HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                                ++ + RR+ri +++  L+el+P+ +      K++ +++LekA+ Y+k Lq
  Pav_sc0000464.1_g790.1.mk 203 IAAKHRRERISERLKILQELVPNgC------KVDLVTMLEKAISYVKFLQ 246
                                56799******************77......******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MALAKDMRMP IDSCTHESLQ VSSDLSNGFV FRATSNYHQP DHQVAHSVIN FKSSGYNSFF  60
QNSESLLSFE KNSKQNILKT SNDKDEHFNC DDDLHHGNYQ WNHTASVSDP RLSGDFNCFQ  120
TASNYSSIPN TSKDDHGDEA YGWLYSEAIV VADGFQEPES QEGFHKRPHT GETMQPLKKQ  180
CTNSGTKKPK PKSSSSSKDP QSIAAKHRRE RISERLKILQ ELVPNGCKVD LVTMLEKAIS  240
YVKFLQLQVK VLATDEFWPV QGGKAPDISQ VKEAIDAILS SQRETSSSSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37800.13e-59bHLH family protein