PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000405.1_g280.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 163aa MW: 18568.2 Da PI: 9.6527 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28 | 3.9e-09 | 52 | 98 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 rE+ RR+r+N++f eL ++l + + +K +K +iL+ Av+ + +Lq Pav_sc0000405.1_g280.1.mk 52 ACREKLRRNRLNERFLELVSVLDPG---RLPKTDKNAILTDAVRALTQLQ 98 689*********************8...89*****************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MFVSGVEADC SSGDSDNLME VGSQKRNMLW PNVLQMPFRL RSESYGASFS KACREKLRRN 60 RLNERFLELV SVLDPGRLPK TDKNAILTDA VRALTQLQSE SKKLKETIES SQANIKVLKA 120 EKSELRDEKH RLRVEKEKLE QQVIAMSAQN DISQDHILRP PTA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 6e-31 | bHLH family protein |