PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000396.1_g530.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 191aa    MW: 21635.9 Da    PI: 9.2991
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000396.1_g530.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.57.3e-0951752348
                               -HHHHHHHHTTTS-HHHHHHHHHHHT CS
            Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                               +W++Ia++++ gRt++++k++w+++l
  Pav_sc0000396.1_g530.1.mk 51 RWSAIASRLP-GRTDNEIKNFWHSHL 75
                               5*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MPKLSIQSNY FFPGIIGLDR RNKSVIIGTS TTRSVLVLCR NSFSVLIVTY RWSAIASRLP  60
GRTDNEIKNF WHSHLKKRVE QERQVPAAAP LQRIQCPIQY APTTFFRLDD DLHNKLLSKT  120
TCSSPNIINA DPGLEPPFSS SSNSTAVQIM KREGSKTHED MDFWYSLFMK AGEPSTVPLP  180
VCHCMWEFSG I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.26e-14MYB_related family protein