PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000383.1_g280.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 216aa MW: 23344.7 Da PI: 4.0913

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000383.1_g280.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.7	8.6e-11	22	54	1	34
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkg 34 rg+WT eEd ll+++++++G g+W++ a++ g g Pav_sc0000383.1_g280.1.mk 22 RGPWTLEEDTLLIQYIARHGEGRWNLLAKRSG-G 54 89***************************998.5 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MSSNTKSLSS TSCSEDESEL RRGPWTLEED TLLIQYIARH GEGRWNLLAK RSGGESSFSS 60 PMLIQNPTAL QPLDNVSQHL TAAAASPPQI PGQGALNMSG TIYNLDSIQK QNAESEFCTS 120 SCILPSEPID MPKMSQFPEC PPSPFHAILN NDNAKGGFCV DNNSYDIEAF NLQGSVSAQG 180 FAGNSAGDCC GAESNWLDSD FSCGMWSMDE LWQSRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25340.2	2e-12	MYB family protein