PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000373.1_g600.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 327aa MW: 36878.4 Da PI: 6.0969

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000373.1_g600.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.3	1e-11	80	121	8	54
HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +Er+RR+++N+++ +Lr+l+P+ + K++Ka+iL A++++k+L Pav_sc0000373.1_g600.1.mk 80 AERKRRKKLNERLYRLRSLVPNiS------KMDKAAILGDAIDFVKDL 121 7*******************66......*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MGLQADADAP NMHNSTHVME ALENMEQQGV EDQDSVKHEA QGGRTADNSG SDCSDQIDDE 60 DDTKYRRRTG KGPQSKNLFA ERKRRKKLNE RLYRLRSLVP NISKMDKAAI LGDAIDFVKD 120 LLRQVKELQD ELEQHSNDEG PNKKTSANIC GNHNNFQPEI LNQNGTSITN KPENDDKPPN 180 GFHVGTAVDI GNISKQQQDS DSTNDRGQQM EPQVGVTQLD GNEFFVTVFC EHKPGGFVRL 240 MEALDTLGLE VTNANVTSFR SLVSNVFKVE ITRNPSSKVW PEMAKAKASE NGSGLDHFHH 300 DDHHHYQQHH LHNYHASSYH LQHLYNY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	66	87	RRRTGKGPQSKNLFAERKRRKK
2	81	88	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	2e-51	bHLH family protein