PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000361.1_g040.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 108aa    MW: 12952 Da    PI: 9.6266
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000361.1_g040.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.22.2e-11489185
                               EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTE....EEE-TTHHHHHHHHT--TT-EEE CS
                         B3  1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgr....yvltkGWkeFvkangLkegDfvv 81
                               f+k+ltpsdv+++  l + k  +e   ++++e+++ +++ de+g+++ ++l+   ++gr    ++ +k Wk Fvk+ g+ +gDf+ 
  Pav_sc0000361.1_g040.1.mk  4 FEKELTPSDVNQR--LAVMKGMLEFLpEIDPENDVPIRVLDETGKVYVFYLSG--RQGRykkpVFQAKHWKVFVKERGIAAGDFMY 85
                               99********976..88889999766999999*******************55..444434657888******************* PP

                               EEE- CS
                         B3 82 Fkld 85
                               F ++
  Pav_sc0000361.1_g040.1.mk 86 FWRE 89
                               9843 PP
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    
MNRFEKELTP SDVNQRLAVM KGMLEFLPEI DPENDVPIRV LDETGKVYVF YLSGRQGRYK  60
KPVFQAKHWK VFVKERGIAA GDFMYFWREE NAFYHTEYRI ALLKPLFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01500.13e-07B3 family protein