PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000359.1_g480.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 311aa    MW: 33528 Da    PI: 9.3393
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000359.1_g480.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2636.5e-203787256
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                               +y GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa a+++a+++l+ge
  Pav_sc0000359.1_g480.1.mk 37 RYVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAAIAYDEAARALRGE 87
                               699******.7*********43...36**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MAGPEVLAKT TTATSSPTKN KTMVTKSPST TKTALRRYVG VRQRPSGRWV AEIKDSSQRV  60
RLWLGTYDTP EEAAIAYDEA ARALRGENAR TNFVSPGPAT NPNSSPLVSS VSNGGFMSGT  120
DGRHGGTGGL SFSSLKAKLS KNLQSIMARS SDHNKSSKSR VSDHFTFASI FNFRKHQYQN  180
PRNPLIDMKN IEKVVQPSII VPHNGEGGTS TEPSSWESSS ISDCSAEWAY GFRQAGVDSE  240
GSEIGEGNIM DQIMGWIDSP DNQMGSRISV GDDDSEEGSR SKRFKVSSSV MVPPTFSTGS  300
PFNNINGETS N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-17ERF family protein