PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000359.1_g030.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 318aa    MW: 36017.5 Da    PI: 5.5813
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000359.1_g030.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1355e-42421672128
                        NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWk 84 
                                ppG+rF+P d elv  yL+kk+++++l+  + i++v++yk++P +L + +++ +e+e+yfF++rdkky++g r+nra+ +gyWk
  Pav_sc0000359.1_g030.1.mk  42 PPGYRFKPLDGELVAIYLRKKIANEPLPP-NKIHDVELYKFNPDTLSEIYESyGEDEMYFFTSRDKKYPNGARPNRAAGDGYWK 124
                                9*************************999.77**************8544443778**************************** PP

                        NAM  85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                atg +k+v+  ++ +vg k++Lvfy+g+ p+g ktdW mhe+++
  Pav_sc0000359.1_g030.1.mk 125 ATGVKKQVKF-EDVEVGSKTSLVFYSGKPPHGDKTDWKMHEFQV 167
                                *********9.9999***************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MEEQSISSKA AIVTKNGSDL HGGHTGSYDS YYDDASYFDS IPPGYRFKPL DGELVAIYLR  60
KKIANEPLPP NKIHDVELYK FNPDTLSEIY ESYGEDEMYF FTSRDKKYPN GARPNRAAGD  120
GYWKATGVKK QVKFEDVEVG SKTSLVFYSG KPPHGDKTDW KMHEFQVNAP PKRKDRNNMR  180
LDDCVLCRIY NKHNQSNVSN QSNDNGVEIQ EQPNVGSNSQ DNAHVSGEVV DHPPANSSLL  240
SNQNCYYNTD QSEILNSTNC IGFDGPFGVV SSSSTPAFQN PQQFNGYQKR QRFCDLPLEF  300
YHTNYDQWLN DAAKDLTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.13e-50NAC family protein