PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000355.1_g250.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GRAS | ||||||||
Protein Properties | Length: 697aa MW: 76786.3 Da PI: 5.4515 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 427.7 | 9.1e-131 | 314 | 682 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklf 84 lv+lL++c+ea+ ++ +++++++a+l elasp+g+++ Rl+ay+teALa r++r +++++++ pp+e + + +++ al+l+ Pav_sc0000355.1_g250.1.mk 314 LVSLLTACVEAIGLKNIAAINHFIAKLGELASPRGTTISRLTAYYTEALALRVTRLWPHVFQITPPREFD-RGDDDSGIALRLL 396 6899*****************************************************************8.4567777899*** PP GRAS 85 sevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakf 168 ++vsPi+kf h+t N+ +l+a+eg++rvHiiDfdi+qGlQWp+L+q+LasR+++p ++RiTg+g+ sk+el+etg+rLa f Pav_sc0000355.1_g250.1.mk 397 NQVSPIPKFLHFTSNEILLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRANPPSHIRITGIGE----SKQELNETGDRLAGF 476 *****************************************************************....*************** PP GRAS 169 AeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnses 252 A +l++pfef++ v++rled++l++L+vk++E++aVn+v+qlh++l + + + +++L l++s++P++v ++eqea+hn+++ Pav_sc0000355.1_g250.1.mk 477 AGALNLPFEFHP-VVDRLEDVRLWMLHVKEQESVAVNCVFQLHKTLYDGTGGA--LRDFLGLIRSTNPTIVLMAEQEAEHNEPR 557 ************.7********************************6655444..489************************** PP GRAS 253 FlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakq 336 + +r++++l++ysa+fd ++++lp es++rikvE++ ++rei+nv+aceg++r erhe++ekWr+ +e+ GF+ + ++e+++ q Pav_sc0000355.1_g250.1.mk 558 LETRVSNSLKHYSAIFDLISSSLPLESQARIKVEEM-FAREIRNVIACEGSDRLERHESFEKWRKLMEQGGFRCMGITEREMLQ 640 ************************************.*********************************************** PP GRAS 337 aklllrkvksdgyrveee....sgslvlgWkdrpLvsvSaWr 374 + ll++++++ y+v+++ ++l+lgW+d+pL++vSaW+ Pav_sc0000355.1_g250.1.mk 641 SQFLLKMYAGENYNVKKQgqdgAAALTLGWMDQPLYTVSAWT 682 *********999****77665567788**************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 697 aa Download sequence |
MLAGCSSSTL LSPRHRLRSE AAAQLQACHF QLPAMSTQRL DLPCSFPRKD TSRSQTIRPV 60 GLSVEKSIDS KTSSCSLKQS IRLPPLATSG PVTSAAQTAA FVEARKEVND QFWEKKRGKS 120 LKRFAEQGSV DDDESCINRA KRKKGCFDNG KGDEGGDGLS LGQLGAGNFW FQPDFHVPRS 180 VQSITTGLDP PPQLPFSLTC SGDEERVCYV PAEAISQPLP LSNNPWLDSI VTEITDLGEK 240 DAETRRGLGR EASAAASSAS SDSQSLGLRL NESASEHEVG NGSRDPYIPH GGAGVEAEDD 300 DDDESEGEHQ GFELVSLLTA CVEAIGLKNI AAINHFIAKL GELASPRGTT ISRLTAYYTE 360 ALALRVTRLW PHVFQITPPR EFDRGDDDSG IALRLLNQVS PIPKFLHFTS NEILLRAFEG 420 KDRVHIIDFD IKQGLQWPSL FQSLASRANP PSHIRITGIG ESKQELNETG DRLAGFAGAL 480 NLPFEFHPVV DRLEDVRLWM LHVKEQESVA VNCVFQLHKT LYDGTGGALR DFLGLIRSTN 540 PTIVLMAEQE AEHNEPRLET RVSNSLKHYS AIFDLISSSL PLESQARIKV EEMFAREIRN 600 VIACEGSDRL ERHESFEKWR KLMEQGGFRC MGITEREMLQ SQFLLKMYAG ENYNVKKQGQ 660 DGAAALTLGW MDQPLYTVSA WTPVDVAGSS SSFSQPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63100.1 | 0.0 | GRAS family protein |