PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000354.1_g880.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 365aa MW: 41788.1 Da PI: 4.9264

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000354.1_g880.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.1	3.6e-09	308	342	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yp+++++ LA+++gL++rq+ +WF N+R ++ Pav_sc0000354.1_g880.1.mk 308 KWPYPTEADKIALAESTGLDQRQINNWFINQRKRH 342 569*****************************885 PP
2	ELK	26.9	1.1e-09	262	283	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LK++L+r +++++g+Lk EFs Pav_sc0000354.1_g880.1.mk 262 DLKDRLMRRFGSHIGTLKLEFS 283 69*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MEEMYGLQST AEYADKGFQS TAEYEDRALM TPENLILPLD YQSLLVSSGA FRGEHHHHRL 60 PMFGSXXXXX XMFGSDDVVL YSAMSEGASP TITPEFQREE DVFGAIKAKI ASHPTYPRLI 120 HAYIECQKVG APPEIASFLD EIRRENDFCN YKQQQQQQQR GSCNSNSSMP STYLGADPEL 180 DEFMETYCEM LVKYKSDLSR PFDEATTFLN KIELQLSNLC TSSAHASSIR TLSDEGGASS 240 DEDFSGGEIE VQEAQQRGED RDLKDRLMRR FGSHIGTLKL EFSKKKKKGK LPKEARQTLF 300 DWWSVHYKWP YPTEADKIAL AESTGLDQRQ INNWFINQRK RHWRPSENMQ FAVMDNISGP 360 FFTDD

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MEEMYGLQST AEYADKGFQS TAEYEDRALM TPENLILPLD YQSLLVSSGA FRGEHHHHRL  60
PMFGSXXXXX XMFGSDDVVL YSAMSEGASP TITPEFQREE DVFGAIKAKI ASHPTYPRLI  120
HAYIECQKVG APPEIASFLD EIRRENDFCN YKQQQQQQQR GSCNSNSSMP STYLGADPEL  180
DEFMETYCEM LVKYKSDLSR PFDEATTFLN KIELQLSNLC TSSAHASSIR TLSDEGGASS  240
DEDFSGGEIE VQEAQQRGED RDLKDRLMRR FGSHIGTLKL EFSKKKKKGK LPKEARQTLF  300
DWWSVHYKWP YPTEADKIAL AESTGLDQRQ INNWFINQRK RHWRPSENMQ FAVMDNISGP  360
FFTDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-130	TALE family protein