PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000354.1_g490.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 129aa    MW: 14564 Da    PI: 4.1583
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000354.1_g490.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.96.5e-10937129
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIar 29
                               +g WT+eEd  l+d+v+ +G+g+W++I++
  Pav_sc0000354.1_g490.1.mk  9 KGLWTKEEDRVLLDYVTVHGSGRWNRIPK 37
                               678************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
MEAENEYKKG LWTKEEDRVL LDYVTVHGSG RWNRIPKLTA PDSNSKQSCS CGTSNSVKDM  60
EALQNDQNPL LDDIVAAENS NSNEEIQWMT EHCADSLSCS NGHNLISWGM VEFLQGYPLD  120
LLYQNFESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14750.15e-14MYB family protein