PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000352.1_g070.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

DBB

Protein Properties

Length: 301aa MW: 31786.5 Da PI: 5.7388

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000352.1_g070.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20	1.4e-06	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC C ++ Hk H++vpl Pav_sc0000352.1_g070.1.mk 4 QCNVCEAAEANVLCCADEAALCWACDEKVHKAnklaskHQRVPL 47 7****99*******************88999999999986 PP
2	zf-B_box	27.9	4.9e-09	52	92	3	37
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 ++kC+ ++e +fC +++ llC++C ++ H H Pav_sc0000352.1_g070.1.mk 52 MPKCDICQEAVGYFFCLEDRALLCRTCDVAVHAAnslvsaH 92 799*****9*******************655555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MKIQCNVCEA AEANVLCCAD EAALCWACDE KVHKANKLAS KHQRVPLSAS HMPKCDICQE 60 AVGYFFCLED RALLCRTCDV AVHAANSLVS AHRRFLLTGI KVGPEPTKPD SGGDGGGGGG 120 GVGVGASSSS VKSRSGSGSG SGSGIGSGSR CDTHNPMPVE CKVAPAGVDV MPFAGGSSAG 180 TVPQWHIDEF LGLSDFDQSF SYIENGSSKA DCGKHGEYDS PALKSSEEEL EDYECIGEVP 240 ETSWMVPQVP SPPTASGLHW PRSSQISSDF AVFVPDICHS QMQNPLYSQH NGTVSKRRRQ 300 F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	3e-87	DBB family protein