PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000348.1_g930.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 657aa MW: 72078.8 Da PI: 6.4854

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000348.1_g930.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.7	2.2e-09	514	551	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + Pav_sc0000348.1_g930.1.mk 514 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 551 664559******************************88 PP
2	BELL	93.5	2e-30	385	445	12	72
BELL 12 LlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 Ll+ Vd+rY++y+eq+q+v+++F+ v+g g+a pYt+lA+ka+SrhFrcLkdai+ q+ Pav_sc0000348.1_g930.1.mk 385 LLEEFCSVDRRYNHYCEQMQMVVNAFDLVMGFGAAVPYTALAQKAMSRHFRCLKDAITAQL 445 5555557***************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 657 aa Download sequence
MSESFTSFHT LQLQERRKWV QRQHKVKDRY DEEEDQEQLD DMGIATVPPL LPTPPSIFSS 60 SSSKGHHHHS IIDSESYSNS PNSMSQDFHH QGIFTFSNGF ERSAMTTHQE QQQQQQHHLA 120 QQIRREKLRV QGFETPPPPP LVGLDEEESG GLPVYETAGM LSEMFNYPPG GGPPGAVELL 180 EHPMAQAYRM ARQQQEPVSG AAEWYGSRVV GGGLGALGDS KNHNSRDSIQ HHHQQQHQIS 240 TINADSAAAM QLFLMNPSQP RSPSPPAHTT SSTLHMLLPN PSSTTNSLQG FATPSGGGGA 300 FGQFTWVPES HHGHDGGNPT GGAGEIGGVV EGQGLSLSLS TSLQHLEAAK AEEFRMGSDS 360 AGSASSFGVV NVLRNSKYVK AAQELLEEFC SVDRRYNHYC EQMQMVVNAF DLVMGFGAAV 420 PYTALAQKAM SRHFRCLKDA ITAQLKHSCE LLGEKDGAGT SGITKGETPR LKMLEQSLRQ 480 QRAFHQMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLHP YPSDADKHLL ARQTGLSRNQ 540 VSNWFINARV RLWKPMVEEM YQQETNDEVG GAATAAADHH HQDQREPDYG TTSGNAHIAA 600 HDHQSSNIGS STTLISFGTT TAAGDVSLTL GLRHAGGGNN MPEKNPSSFS IRDFGGC

Sequence ? help Back to Top

Protein Sequence Length: 657 aa Download sequence

MSESFTSFHT LQLQERRKWV QRQHKVKDRY DEEEDQEQLD DMGIATVPPL LPTPPSIFSS  60
SSSKGHHHHS IIDSESYSNS PNSMSQDFHH QGIFTFSNGF ERSAMTTHQE QQQQQQHHLA  120
QQIRREKLRV QGFETPPPPP LVGLDEEESG GLPVYETAGM LSEMFNYPPG GGPPGAVELL  180
EHPMAQAYRM ARQQQEPVSG AAEWYGSRVV GGGLGALGDS KNHNSRDSIQ HHHQQQHQIS  240
TINADSAAAM QLFLMNPSQP RSPSPPAHTT SSTLHMLLPN PSSTTNSLQG FATPSGGGGA  300
FGQFTWVPES HHGHDGGNPT GGAGEIGGVV EGQGLSLSLS TSLQHLEAAK AEEFRMGSDS  360
AGSASSFGVV NVLRNSKYVK AAQELLEEFC SVDRRYNHYC EQMQMVVNAF DLVMGFGAAV  420
PYTALAQKAM SRHFRCLKDA ITAQLKHSCE LLGEKDGAGT SGITKGETPR LKMLEQSLRQ  480
QRAFHQMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLHP YPSDADKHLL ARQTGLSRNQ  540
VSNWFINARV RLWKPMVEEM YQQETNDEVG GAATAAADHH HQDQREPDYG TTSGNAHIAA  600
HDHQSSNIGS STTLISFGTT TAAGDVSLTL GLRHAGGGNN MPEKNPSSFS IRDFGGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-112	TALE family protein