PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000348.1_g610.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 956aa MW: 107896 Da PI: 8.7635 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 31.3 | 3.7e-10 | 24 | 108 | 10 | 99 |
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 vl+++ l +p + ++++g + t+ l+ +++ +W v l k+ g+++l++GW++F++ L g +++F+++g s f Pav_sc0000348.1_g610.1.mk 24 VLSKDVLKFPESVVTKYGDC--LGDTVFLKVPNSAVWPVGL--IKRNGQVWLQQGWSNFADFYSLAFGYVLLFSYEGLhSHF-- 101 57788899999999999755..6679***************..888899**************************9876777.. PP EEEEE-S CS B3 93 vvkvfrk 99 v++f + Pav_sc0000348.1_g610.1.mk 102 QVRIFMR 108 8888765 PP | |||||||
2 | B3 | 38.7 | 1.8e-12 | 154 | 240 | 8 | 99 |
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 + +l+ g+l +p + ++g t +e ++g W ++l +++++++ l++GW eF+k+ L++g f+vF++ g+ s f Pav_sc0000348.1_g610.1.mk 154 ERTLQDGMLEIPIIAVHTYGDY--IADTAYFEVPDGSIWPIEL--TRRDREICLGRGWPEFAKSYSLEDGCFLVFSYAGKcSHF 233 4566778899999999888655..4458***************..********************************9966666 PP ..EEEEE-S CS B3 91 elvvkvfrk 99 +++frk Pav_sc0000348.1_g610.1.mk 234 --QLRIFRK 240 ..9999987 PP | |||||||
3 | B3 | 51 | 2.7e-16 | 319 | 413 | 5 | 98 |
-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEE CS B3 5 ltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvF 82 + ps+vl++ l+++ +f+ +h + ++ +tl+ ++ ++W+ ++ ++ + g+ + GW+ Fv++n+L+egD +vF Pav_sc0000348.1_g610.1.mk 319 MQPSYVLNH--LRISSSFVMKHilsD----GECNVTLQISDKKTWSARCMIDVYCGQlcaRLHHHGWQAFVRDNQLEEGDACVF 396 445566655..9**********6432....33479999999********987777774435566******************** PP EE-SS.SEE..EEEEE- CS B3 83 kldgr.sefelvvkvfr 98 +l+++ + +l+v++fr Pav_sc0000348.1_g610.1.mk 397 ELIEKaPKIKLRVRIFR 413 ***988*********98 PP | |||||||
4 | B3 | 50.1 | 4.8e-16 | 490 | 593 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEE.TTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltled.esgrsWevkliy...rkksgryvltkGWkeFvkangLkeg 77 ff ++ ++l+++ l ++ +fa+++ g+ + ++tl+ + rsW vk+i +++s++ + GW Fvk+n+L+eg Pav_sc0000348.1_g610.1.mk 490 FFVMKMHLSYLSTH-LPISVPFANKYicaRGV-SS--DVTLQIsNDERSWPVKCITtvyNGSSRTSFHNFGWGAFVKDNHLEEG 569 66667788999998.9**********997555.34..4555542688*******767768888889999*************** PP -EEEEEE-.SS.SEE..EEEEE-S CS B3 78 DfvvFkld.gr.sefelvvkvfrk 99 D +vF+l+ + ++ ++v++fr+ Pav_sc0000348.1_g610.1.mk 570 DACVFELInKGpDKIAFKVGIFRT 593 ******994445666778888875 PP | |||||||
5 | B3 | 43.4 | 6e-14 | 593 | 671 | 17 | 99 |
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++p fa++h k ++ +l+ ++g +W+v + y k + ++++GW+ Fv++n+Lk gD++vF l+++ + ++ v +fr+ Pav_sc0000348.1_g610.1.mk 593 TVPTGFAKRHLTK--QTANAILKVSDGGTWSVMFAYPKL--KATFQQGWRVFVRDNNLKLGDVCVFILIKDIKLSFEVVFFRA 671 6899******544..4557999************55444..4779***********************999777778888775 PP | |||||||
6 | B3 | 56.2 | 6.5e-18 | 694 | 775 | 14 | 98 |
T-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 14 grlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 l +p +fa++h k++ ++l+ ++gr+W v+++y+++ r +++GW+ F+++n+Lk+gD++vF l++r+e+ l v + Pav_sc0000348.1_g610.1.mk 694 YTLQFPHPFARQHlV--KQSAGNIILKILDGRTWPVEFKYENSMAR--FQNGWSAFARDNNLKVGDVCVFVLIDRNERLLEVVF 773 56789********53..445558***************77777655..9************************99777677776 PP E- CS B3 97 fr 98 +r Pav_sc0000348.1_g610.1.mk 774 YR 775 66 PP | |||||||
7 | B3 | 50.2 | 4.6e-16 | 875 | 956 | 15 | 99 |
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 l +p fa+++ + +++t+tl+ + rsW+v+li + k ++ l++GW F+ +n L+ gD+++F+l++r++ l+v++fr Pav_sc0000348.1_g610.1.mk 875 SLHVPVGFARSFVKR--RKQTVTLQV-RERSWRVNLIGWTKESSAKLSGGWPAFATENCLRGGDVCMFELIERNDIVLKVHIFR 955 5889*****999644..555777655.88********9**********************************99999*****99 PP S CS B3 99 k 99 + Pav_sc0000348.1_g610.1.mk 956 H 956 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 956 aa Download sequence |
MGSSSRHGKG LAFPVDSRSF FKIVLSKDVL KFPESVVTKY GDCLGDTVFL KVPNSAVWPV 60 GLIKRNGQVW LQQGWSNFAD FYSLAFGYVL LFSYEGLHSH FQVRIFMRSP LEIDYFGSSV 120 KEEHNLNGEM DYSNSSESPA SLVNAPSFFK IILERTLQDG MLEIPIIAVH TYGDYIADTA 180 YFEVPDGSIW PIELTRRDRE ICLGRGWPEF AKSYSLEDGC FLVFSYAGKC SHFQLRIFRK 240 NTLEMEYNSS SDDTEGNSNT SGDQTEGEKR THGGDGGKTA SHRSSEVDLR TAKLESLKGR 300 AFAKASSFKY DNPFTVIRMQ PSYVLNHLRI SSSFVMKHIL SDGECNVTLQ ISDKKTWSAR 360 CMIDVYCGQL CARLHHHGWQ AFVRDNQLEE GDACVFELIE KAPKIKLRVR IFRDKDQEQE 420 RGQRPCISIE HSISKLPQDC RSAGSSRWEA CADHGGKSTA SEAPLRTFAK TELEDLAYSK 480 ALSFKSNNPF FVMKMHLSYL STHLPISVPF ANKYICARGV SSDVTLQISN DERSWPVKCI 540 TTVYNGSSRT SFHNFGWGAF VKDNHLEEGD ACVFELINKG PDKIAFKVGI FRTVPTGFAK 600 RHLTKQTANA ILKVSDGGTW SVMFAYPKLK ATFQQGWRVF VRDNNLKLGD VCVFILIKDI 660 KLSFEVVFFR ATEAANCSLP PGRPWQRSNE KQGYTLQFPH PFARQHLVKQ SAGNIILKIL 720 DGRTWPVEFK YENSMARFQN GWSAFARDNN LKVGDVCVFV LIDRNERLLE VVFYRTNEAE 780 DCPLSPGLGG GAIDQVEKRR SPINKVETGR TTICENGVSC SLDPSLEIGR YKGLKTDEQI 840 TQRPLNSSST ALEAANRFIP KNPSFRATLG PTYQSLHVPV GFARSFVKRR KQTVTLQVRE 900 RSWRVNLIGW TKESSAKLSG GWPAFATENC LRGGDVCMFE LIERNDIVLK VHIFRH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 7e-18 | B3 family protein |