PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000348.1_g270.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 337aa MW: 35798.7 Da PI: 8.7933

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000348.1_g270.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.9	5.4e-39	61	118	4	61
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk++ Pav_sc0000348.1_g270.1.mk 61 ENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKSA 118 6789***************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MIQELFGGAG LSNIAGGGER KLISIHGGTT SSPSLSPSQS PSSSTTTTTT ATATTTTTTG 60 ENLRCPRCDS SNTKFCYYNN YNLTQPRHFC KTCRRYWTKG GALRNVPIGG GCRKNKSATV 120 STTPIGKAAG GKLKMVASEI GRSGFSGGFD NDVQASPILW GSPQNSHLLA LLRASHQNQN 180 PNPNPNPICN SVNVKEEGAM NMIGSHMMTT EPAMSTARTL GLDPVCQAPS LGLCSSFWRN 240 NNQNQQPPHH NQQNGFPVGH EVQSNIGIQE LFQRLRSSSS SSGGYYSDHL NNVVMSSSST 300 SSILDSTPAV GGGEMGYWNP AFTAWSSDLP TTNGAYH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	1e-34	Dof family protein