PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000311.1_g410.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 375aa MW: 42658.4 Da PI: 5.8592

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000311.1_g410.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.5	9.5e-08	314	346	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp++e++++L +++gL+ +q+ +WF N+R + Pav_sc0000311.1_g410.1.mk 314 WPYPTEEDKARLVQETGLQLKQINNWFINQRKR 346 69*****************************87 PP
2	ELK	29	2.4e-10	267	288	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ Pav_sc0000311.1_g410.1.mk 267 ELKHELKQGYKEKIVDIREEIL 288 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MAFHHHHHHQ QQQNPPEMAF HSFASDQPPL SGAPTWLNNA AFRQQNSFLH DARNDDVVIS 60 PSGKSSNCSG RNRREISGYD GEEEEEDELE CESARFKADL VGHPLYEQLV SAHVSCLRIA 120 TPVDQLPRID EQLVQSQRVV DKYSALRANG DVQVMDEKEL DLFMTNYVLL LCSFKEQLQQ 180 HVRVHAMEAV MACWELDQSL QSLTARDAFT GVSTGEGTGA TMSDDDDQVD SDINSYDGSL 240 DGPDTMGFGP LVPTESERSL MERVRQELKH ELKQGYKEKI VDIREEILRK RRAGKLPGDT 300 TSVLKSWWQS HSKWPYPTEE DKARLVQETG LQLKQINNWF INQRKRNWHS NISSTSVLKS 360 KRKSNAGDVS SQRLK

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MAFHHHHHHQ QQQNPPEMAF HSFASDQPPL SGAPTWLNNA AFRQQNSFLH DARNDDVVIS  60
PSGKSSNCSG RNRREISGYD GEEEEEDELE CESARFKADL VGHPLYEQLV SAHVSCLRIA  120
TPVDQLPRID EQLVQSQRVV DKYSALRANG DVQVMDEKEL DLFMTNYVLL LCSFKEQLQQ  180
HVRVHAMEAV MACWELDQSL QSLTARDAFT GVSTGEGTGA TMSDDDDQVD SDINSYDGSL  240
DGPDTMGFGP LVPTESERSL MERVRQELKH ELKQGYKEKI VDIREEILRK RRAGKLPGDT  300
TSVLKSWWQS HSKWPYPTEE DKARLVQETG LQLKQINNWF INQRKRNWHS NISSTSVLKS  360
KRKSNAGDVS SQRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-153	TALE family protein