PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000308.1_g480.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 341aa MW: 38430.6 Da PI: 4.9989

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000308.1_g480.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.4	5.7e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++++G+g +W + ++++g++R++k+c++rw++yl Pav_sc0000308.1_g480.1.mk 14 KGPWSPEEDARLKAYIEEHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDARLKAYIE EHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC NLYISIGSSE DHLKDAEDAH ALSSSALERL QLHMQLQSLQ 120 NPFSFYNTPA LWPKLHPLQE KMIQTLRSMN DQNCNPLMHH HALSSPHQTV EGHKSNSDVY 180 EQLQPTSASI RIQEEYAKLC NPKNMDELEN ALNGMSCSDA AYHAFISTSN QVDSTIVVTE 240 AADGMEHSND AGTHDHQQVN SSFQTEFGDI LSNKSVAYTP QQEDDQIAEF DCFKEMNGPK 300 DSLVWWANEF DAKSASSNSW DSTSVLQSQG MFQDYELRYN L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	5e-72	MYB family protein