PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000259.1_g640.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 268aa    MW: 29153.6 Da    PI: 7.3697
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000259.1_g640.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.78.3e-1161102647
                                HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding   6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                 eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
  Pav_sc0000259.1_g640.1.mk  61 DEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 102
                                69***************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MAGTCSTVEP AGAGEIMLFG VRVVVDSMRK SVSLNNLSQY EQPQEGSNNN SGNNNITGKD  60
DEEHKLFLLG LQKVGKGDWR GISRNFVKTR TPTQVASHAQ KYFLRRNNHN RRRRRSSLFD  120
ITTDTVTATP MDEEQAHHQD NTSQSHPLPP PPPSEACNPS GFSMVPNFPL TVGPAVLPVP  180
IENPMGNLTL GHTNLENNAS ARLVRPIALH SAPHATAMSD LNLKSTMDTS TLTLDLSLSM  240
DPRESSSRHS AFQAMPSFSN GDSIISVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.26e-42MYB_related family protein