PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000254.1_g1540.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 634aa MW: 71660.8 Da PI: 5.6171

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000254.1_g1540.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.6	1.4e-08	530	578	2	47
SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 ++WT+eE+++++d vk ++ W+ I + ++ ++++ +++s+++++ Pav_sc0000254.1_g1540.1.mk 530 LSWTPEEEKKFKDIVKSNPPSlgitFWDQIFKSFP-KKSRRELVSYYFNV 578 58***************88**********.9********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 634 aa Download sequence
MVADGSALDC AKTPKKNETD GFSVDLEPPS EAPERCVLDV PDKLRCWFDQ LLGVFLKEIS 60 AQGLLRPLPP MIGNGQRVDL LKLFWVVRKR GGFDTISKIS VWDSVAKECG LGWGLGWAVK 120 LVYVKYLHLL ERVIENKDLE WSVDISGLDL TGQFMDLEDK LTKVFPEISD QKVEDGGYPH 180 AELSPKNFKD SNEVGNEIAE SDRPKKSVVS EAFLDLDSRK DAGKFCNGDV PLSGGAMKCT 240 VNLMNKNLDL TNSMEDVGKV CDNGEVSEVG ESGRGKKYND CDEDVIILDP SPGEVSSSRK 300 RKRGSSCGSE VGESRRGKKY NDISNEDALI LDPSTDEEAN CFWKRKQESL YGMLNWVRMI 360 AKDPCDPAVG SLPERSKWKS FGNEENWMQV LWAREAIFVK KHADSSAEQS NWQLLGTSDF 420 TGVLDRYPPS HIPLGSHYQA HLPEWTGEAS ESELKWLGSR FWPLEKPEHR YLIERDPIGK 480 GRQESCGCQV SGSIECVRFH ISEKRLRVKR ELGPAFYHWE FNQMGEEVGL SWTPEEEKKF 540 KDIVKSNPPS LGITFWDQIF KSFPKKSRRE LVSYYFNVFL LHRRGYQNRF TPNNIDSDDE 600 GLESGSVTNG FGDEEHKPSK SILKSPHKPH AKCR

Sequence ? help Back to Top

Protein Sequence Length: 634 aa Download sequence

MVADGSALDC AKTPKKNETD GFSVDLEPPS EAPERCVLDV PDKLRCWFDQ LLGVFLKEIS  60
AQGLLRPLPP MIGNGQRVDL LKLFWVVRKR GGFDTISKIS VWDSVAKECG LGWGLGWAVK  120
LVYVKYLHLL ERVIENKDLE WSVDISGLDL TGQFMDLEDK LTKVFPEISD QKVEDGGYPH  180
AELSPKNFKD SNEVGNEIAE SDRPKKSVVS EAFLDLDSRK DAGKFCNGDV PLSGGAMKCT  240
VNLMNKNLDL TNSMEDVGKV CDNGEVSEVG ESGRGKKYND CDEDVIILDP SPGEVSSSRK  300
RKRGSSCGSE VGESRRGKKY NDISNEDALI LDPSTDEEAN CFWKRKQESL YGMLNWVRMI  360
AKDPCDPAVG SLPERSKWKS FGNEENWMQV LWAREAIFVK KHADSSAEQS NWQLLGTSDF  420
TGVLDRYPPS HIPLGSHYQA HLPEWTGEAS ESELKWLGSR FWPLEKPEHR YLIERDPIGK  480
GRQESCGCQV SGSIECVRFH ISEKRLRVKR ELGPAFYHWE FNQMGEEVGL SWTPEEEKKF  540
KDIVKSNPPS LGITFWDQIF KSFPKKSRRE LVSYYFNVFL LHRRGYQNRF TPNNIDSDDE  600
GLESGSVTNG FGDEEHKPSK SILKSPHKPH AKCR