PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000243.1_g260.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 294aa    MW: 32179.4 Da    PI: 9.1021
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000243.1_g260.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.4e-20153203256
                        AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                 y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+++l+g+
  Pav_sc0000243.1_g260.1.mk 153 NYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRGA 203
                                59*******.**********32....25**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MNSKAMATVP FCHNPLTFQA PETFRFLSEA NSLYESLLSE THFSVSPVSF PNQLNIFNPP  60
CHTNVSAEIP ICGVSGKESE SKTETPPVLD GIAAVVGQHV LYGSEKTCNV PTNGEKTQIS  120
EFSYFSERIG SAETSKKDAD NIKGIGNLSV QKNYRGVRKR PWGRWSAEIR DRIGRCRHWL  180
GTFDTAEEAA RAYDAAARRL RGAKARTNFE IPSVFPLSSP CSSSSSSDAK RVSSGKNNMK  240
GLKSKRKCSV VTCVAHLFSE APTHLRSQVM EMKENVELDL KLGVGVSDIG KTSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.19e-23ERF family protein