PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000220.1_g260.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 459aa MW: 51836.8 Da PI: 4.7368

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000220.1_g260.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.2	3.3e-07	262	309	3	47
SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 rW++eE+e ++++v + Wk + ++ R+ +++s+++++ Pav_sc0000220.1_g260.1.mk 262 RWSEEEEETFLEVVYSNPASvgrnFWKQLSVVFP-SRSKRELVSYYFNV 309 9***********9999889999******.*********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MGFKRPFDDV DFQELPFKHP RQLEFSDKLA PFSDAVSCYG APRKTYVSGE DGHVVGKSQW 60 LEVLEKYTVN ENSTPVNKVI GAPFSLTTRS CREEDVGPRP DAYSPPAGDF EFDFPRRTFV 120 PFKDVYSSLA DRSPRKPVPV GPDHQARIPT WTGRVKCLDQ TDESNLNRFS LHFLESEKVV 180 NNASEEKLLG TSVIPMPDSN LSALKCDKVG LGRTDCSCLD PGTVRCVQKH VMDAREELRR 240 TLGNEKFVKL GFCDMGEEVA RRWSEEEEET FLEVVYSNPA SVGRNFWKQL SVVFPSRSKR 300 ELVSYYFNVF MLRRRAVQNR SNILEIDSDD DEWHGDNGGC TREEFDFQDD SCVSFEFQSN 360 MHDSCDRIDA GAAGSALQVT GFRNDRSKCL HGQPDASSDV VGHAYLLEPC DAKVWDARFP 420 LDAMKGVDVL PTWSMIEEIF DEGMGDYKTR DEQKGPASG

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MGFKRPFDDV DFQELPFKHP RQLEFSDKLA PFSDAVSCYG APRKTYVSGE DGHVVGKSQW  60
LEVLEKYTVN ENSTPVNKVI GAPFSLTTRS CREEDVGPRP DAYSPPAGDF EFDFPRRTFV  120
PFKDVYSSLA DRSPRKPVPV GPDHQARIPT WTGRVKCLDQ TDESNLNRFS LHFLESEKVV  180
NNASEEKLLG TSVIPMPDSN LSALKCDKVG LGRTDCSCLD PGTVRCVQKH VMDAREELRR  240
TLGNEKFVKL GFCDMGEEVA RRWSEEEEET FLEVVYSNPA SVGRNFWKQL SVVFPSRSKR  300
ELVSYYFNVF MLRRRAVQNR SNILEIDSDD DEWHGDNGGC TREEFDFQDD SCVSFEFQSN  360
MHDSCDRIDA GAAGSALQVT GFRNDRSKCL HGQPDASSDV VGHAYLLEPC DAKVWDARFP  420
LDAMKGVDVL PTWSMIEEIF DEGMGDYKTR DEQKGPASG