PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000220.1_g160.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 350aa    MW: 39955.6 Da    PI: 4.4689
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000220.1_g160.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM70.54.5e-22391473106
                        NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyat.gkrknratksgy 82 
                                +G+rF+P+++++vv+yL +k+ g++l+++++ike+ +y+++P +Lp+   k+  + +e ++F+ +++ y++ gk ++r+tksgy
  Pav_sc0000220.1_g160.1.mk  39 VGYRFDPSEDQIVVFYLFNKILGRELPINDIIKEISVYEHDPDELPNgdfKHGVDCNEAFYFAYTEQVYSSrGKITRRTTKSGY 122
                                7*********************************************5444444466799********99963777888****** PP

                        NAM  83 Wkatgkdkevlsk.kgelvglkktL 106
                                W   g+++ev+   ++ +vg  k++
  Pav_sc0000220.1_g160.1.mk 123 WDLDGEEEEVKYGnGDITVGFEKVM 147
                                **********986345557777766 PP
2NAM72.88.5e-23215315197
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyat.gkrknratks 80 
                                lp G+rF+P+++e+vv+yL +k+ +++l++++vike+ +y+++P +Lp+   k+  + +e ++F+ +++ y++ gk ++r+tks
  Pav_sc0000220.1_g160.1.mk 215 LPTGYRFDPSEDEIVVYYLFNKILDRELPITDVIKEISVYDHDPDELPNgdfKHGCDCNEAFYFTYTEQIYSSeGKITRRTTKS 298
                                699*********************************************5444444467799********99963677777**** PP

                        NAM  81 gyWkatgkdkevlskkg 97 
                                gyW   g+++ev+ ++g
  Pav_sc0000220.1_g160.1.mk 299 GYWDLDGEEEEVKYSNG 315
                                ************98643 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MALPSPQSTS QVAETEKDFD LLKCSKIENG KKEAEIHLVG YRFDPSEDQI VVFYLFNKIL  60
GRELPINDII KEISVYEHDP DELPNGDFKH GVDCNEAFYF AYTEQVYSSR GKITRRTTKS  120
GYWDLDGEEE EVKYGNGDIT VGFEKVMNKA SPTTHQLKLK LKLKPTPKLR LSVSSLFMAL  180
PSPQSTSQVP ETEKDFDLLK CSKIENGKKE ADVDLPTGYR FDPSEDEIVV YYLFNKILDR  240
ELPITDVIKE ISVYDHDPDE LPNGDFKHGC DCNEAFYFTY TEQIYSSEGK ITRRTTKSGY  300
WDLDGEEEEV KYSNGDITVG IIHEGISNYQ PTFKLPPGWT TRPVDEGEPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01550.12e-14NAC family protein