PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000220.1_g1240.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 430aa MW: 46925.3 Da PI: 6.0786

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000220.1_g1240.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.3	8.5e-14	171	219	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqk 46 rg W + Ed +l+++v+++G+ +W++Ia+++ ++t++ +k++w+ Pav_sc0000220.1_g1240.1.mk 171 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLEgrsGKKTDNAVKNHWHV 219 899******************************99********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
FDVTISICDR KGNEGMANNG AIYVTENPNA FSCFSSAPSF SSSSPSCSMG MVYADMGSLS 60 LSSNYGVVSS VSSQESSYIS KLSEVENGRG FWGFPPMGNC NNRSSEDYHH NTDMDDGKGS 120 DSSSDHESGE NNQTSMNDQK ANLINHEKYP NENVVIGGKE TESGQSKHCA RGHWRPAEDS 180 KLKELVALYG PQNWNLIAEK LEGRSGKKTD NAVKNHWHVI MARKYREQSS AYRRRKLSQT 240 VYRRMEEDPS FNVSRSTEPP SYCTIDLPPN GGLSNSTLSP FPYGTSYNGV GCGVDYYGSN 300 GSPNMTRAEE EAIPSKKVLP FEFFPGTKSN EGVMGIVSQS RSWDSSSDIE GHLCNLHPHH 360 QPYMMATQQA NYHNLLHSYS DSTISASPRQ VSAGKPSPSA AAASDEDRVG GSHHETLPPP 420 FIDFLGVGAT

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

FDVTISICDR KGNEGMANNG AIYVTENPNA FSCFSSAPSF SSSSPSCSMG MVYADMGSLS  60
LSSNYGVVSS VSSQESSYIS KLSEVENGRG FWGFPPMGNC NNRSSEDYHH NTDMDDGKGS  120
DSSSDHESGE NNQTSMNDQK ANLINHEKYP NENVVIGGKE TESGQSKHCA RGHWRPAEDS  180
KLKELVALYG PQNWNLIAEK LEGRSGKKTD NAVKNHWHVI MARKYREQSS AYRRRKLSQT  240
VYRRMEEDPS FNVSRSTEPP SYCTIDLPPN GGLSNSTLSP FPYGTSYNGV GCGVDYYGSN  300
GSPNMTRAEE EAIPSKKVLP FEFFPGTKSN EGVMGIVSQS RSWDSSSDIE GHLCNLHPHH  360
QPYMMATQQA NYHNLLHSYS DSTISASPRQ VSAGKPSPSA AAASDEDRVG GSHHETLPPP  420
FIDFLGVGAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	2e-29	MYB family protein