PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000206.1_g620.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 972aa MW: 106908 Da PI: 7.228

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000206.1_g620.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.7	2.1e-18	411	511	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfv 80 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ ++++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v Pav_sc0000206.1_g620.1.mk 411 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPIRIQDVKGNEWMFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTV 493 99************************555556677***********99899999999.************** PP EEEE-SSSEE..EEEEE-S CS B3 81 vFkldgrsefelvvkvfrk 99 +F++++ +++lv++++++ Pav_sc0000206.1_g620.1.mk 494 TFSRID-PGGRLVMGFRKA 511 *887.777788877765 PP

Sequence ? help Back to Top
Protein Sequence Length: 972 aa Download sequence
MTSRFQDLGF AGVEFGIMGS RICMNVLCGT TNTHEWKKGW PLRSGGFAHL CFKCGAAYEK 60 LVYCDKFHAG ETGWRDCSLC RKPLHCGCIV SKSLYECLDY GGVGCISCAK SSQPRVIQND 120 DVLNGFGGLK ISNYSDRQST VVQNGAFSNT VDEGKLLQLC KIMEANESNL LPQPQRGDIN 180 VSLVQKKQEE VINHNGEVGL GFPSTTQPSI GSLTFSKSDN GRTMIEDINK SSSQPSLSMT 240 LGSPSATPSF VQPFPGGLVD GREQSKTPSS FQQGHGREQS MTPSFQQGLV DGREQSKTPS 300 SFQQGLVDGR EQSKTPSSFQ QGLVDGREQS KTPSSFQQGQ KSRPILPKPL KPSVTMSSET 360 NKGGFPNVRV ARPPAEGRGK NQLLPRYWPR ITDQELQKLS GDLNSAIVPL FEKVLSASDA 420 GRIGRLVLPK ACAEAYFPPI SQSEGLPIRI QDVKGNEWMF QFRFWPNNNS RMYVLEGVTP 480 CIQSMQLQAG DTVTFSRIDP GGRLVMGFRK ASKSLDMQDP QKSMLPNGST PGETSCPNVV 540 ENPATGSGHL GLFQTNTGSK DPHLHALSEH LHLTDGDMSL HKNDYHGHRT SEDLLQQPVL 600 NSDKKRARNI GPKSKRLLMH SEDVLELRLT WEEAQDLLRP PPSVKPSIVT IEDHEFEEYD 660 EPPVFGKRSL FTASSSERQE QWAQCDDCSK WRRLPADVLL PPKWTCSENS WDTSRRSCSA 720 PEEMSQKDLD SLLRASKDLK KRRIIENCTE AQEHEPSGLD ALASAAILGD NVVDSGEQSV 780 GATTRHPRHR PGCTCIVCIQ PPSGKGKHKP TCTCNVCLTV RRRFKTLMMR KKKRQSEREA 840 ENAQKDNNNH KDESEINGPS TEVGLHMNHS SENGGCQSRI EADVAESSSA GQIDLNCEPN 900 PYVQASGLTL LRLADAASQP LNNFMKESCL TNMMCEPKAG IGSSLLTQAT DESERRLSAV 960 AAWDCEGRGD AD

Sequence ? help Back to Top

Protein Sequence Length: 972 aa Download sequence

MTSRFQDLGF AGVEFGIMGS RICMNVLCGT TNTHEWKKGW PLRSGGFAHL CFKCGAAYEK  60
LVYCDKFHAG ETGWRDCSLC RKPLHCGCIV SKSLYECLDY GGVGCISCAK SSQPRVIQND  120
DVLNGFGGLK ISNYSDRQST VVQNGAFSNT VDEGKLLQLC KIMEANESNL LPQPQRGDIN  180
VSLVQKKQEE VINHNGEVGL GFPSTTQPSI GSLTFSKSDN GRTMIEDINK SSSQPSLSMT  240
LGSPSATPSF VQPFPGGLVD GREQSKTPSS FQQGHGREQS MTPSFQQGLV DGREQSKTPS  300
SFQQGLVDGR EQSKTPSSFQ QGLVDGREQS KTPSSFQQGQ KSRPILPKPL KPSVTMSSET  360
NKGGFPNVRV ARPPAEGRGK NQLLPRYWPR ITDQELQKLS GDLNSAIVPL FEKVLSASDA  420
GRIGRLVLPK ACAEAYFPPI SQSEGLPIRI QDVKGNEWMF QFRFWPNNNS RMYVLEGVTP  480
CIQSMQLQAG DTVTFSRIDP GGRLVMGFRK ASKSLDMQDP QKSMLPNGST PGETSCPNVV  540
ENPATGSGHL GLFQTNTGSK DPHLHALSEH LHLTDGDMSL HKNDYHGHRT SEDLLQQPVL  600
NSDKKRARNI GPKSKRLLMH SEDVLELRLT WEEAQDLLRP PPSVKPSIVT IEDHEFEEYD  660
EPPVFGKRSL FTASSSERQE QWAQCDDCSK WRRLPADVLL PPKWTCSENS WDTSRRSCSA  720
PEEMSQKDLD SLLRASKDLK KRRIIENCTE AQEHEPSGLD ALASAAILGD NVVDSGEQSV  780
GATTRHPRHR PGCTCIVCIQ PPSGKGKHKP TCTCNVCLTV RRRFKTLMMR KKKRQSEREA  840
ENAQKDNNNH KDESEINGPS TEVGLHMNHS SENGGCQSRI EADVAESSSA GQIDLNCEPN  900
PYVQASGLTL LRLADAASQP LNNFMKESCL TNMMCEPKAG IGSSLLTQAT DESERRLSAV  960
AAWDCEGRGD AD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	821	832	RRRFKTLMMRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein