PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000192.1_g040.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 239aa MW: 26561.6 Da PI: 6.7342 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25 | 4.3e-08 | 1 | 23 | 23 | 46 |
-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46 +W++Ia++++ +Rt++++k++w++ Pav_sc0000192.1_g040.1.mk 1 RWSAIAAHLP-KRTDNEIKNYWHS 23 4*********.***********86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
RWSAIAAHLP KRTDNEIKNY WHSRLKKRLA LKGYDPVTHR PKTTIFGSAN GSTDDPKTGS 60 NLNHIAQWES ARLQAEARFV RDSDLHKQAN HPYNNNDISA TSSILLGHNK DFGPTDQLFG 120 QNTPQCLDIL RAWESILMSN DSKAAGGQDH VSSFGNHLAG DFEPPLISAI SSNGSSLMDC 180 FFHEPVGQCF DENYGTSITE PFAVHNNMGF KNGACLEDFG LWEVIMQGRK DCPISRISM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01140.1 | 1e-30 | MYB family protein |