PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000175.1_g580.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | C2H2 | ||||||||
Protein Properties | Length: 117aa MW: 13510.4 Da PI: 8.6861 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13 | 0.0003 | 12 | 33 | 3 | 23 |
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 C +C+ +F+++ + Hi+ H Pav_sc0000175.1_g580.1.mk 12 CDYCDIPFNNHAQVLEHIKDnH 33 ******************9766 PP | |||||||
2 | zf-C2H2 | 10.7 | 0.0016 | 88 | 107 | 2 | 19 |
EET..TTTEEESSHHHHHHH CS zf-C2H2 2 kCp..dCgksFsrksnLkrH 19 +C+ +C++ Fs+ s+++ H Pav_sc0000175.1_g580.1.mk 88 VCNkpKCHRKFSNISQFEDH 107 68999*************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 117 aa Download sequence |
MNYQFDEDSV FCDYCDIPFN NHAQVLEHIK DNHPGALKAK AEYVEKGEII ICNLCSNGHI 60 NAKEFKNNNG LIYHQKMVHR GSKSKFIVCN KPKCHRKFSN ISQFEDHKPR CGKTLKA |