PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000175.1_g230.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 219aa MW: 25857.3 Da PI: 9.9884 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 61.2 | 3.2e-19 | 6 | 112 | 1 | 88 |
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk.................tekerrtraetrtgCkakl 66 ++Y+eY+++ GF +r+++s+k+ +r +e+++r+fvC egk +++++ +++ ++ ++ ++gCka++ Pav_sc0000175.1_g230.1.br 6 NYYEEYGRQEGFWIRTRSSSKTrRRLDEVKSRQFVCAHEGKYVPKNTTqkaseenderniseienMKRTGKNCSTVKCGCKASM 89 69*************9998888678899*************99888888899*99999999998666667788999******** PP FAR1 67 kvkkek.dgkwevtkleleHnHe 88 ++k+++ ++kw+v++++ HnH+ Pav_sc0000175.1_g230.1.br 90 RIKLDRwSNKWKVSSFQDSHNHK 112 **********************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MEEARNYYEE YGRQEGFWIR TRSSSKTRRR LDEVKSRQFV CAHEGKYVPK NTTQKASEEN 60 DERNISEIEN MKRTGKNCST VKCGCKASMR IKLDRWSNKW KVSSFQDSHN HKPVTPERRM 120 KMKSNRIMPK AAKILTETFH EENLPIAKVP SILGGPHIGF NNRDCYNHLR NVRHRQLDGG 180 DAQSVLTYFR KKQAENPQFF YAIQCDEREL MDYLFGDRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 3e-26 | FAR1 family protein |