PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000138.1_g1050.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 943aa MW: 106224 Da PI: 8.2125

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000138.1_g1050.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119.9	9.5e-38	667	727	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 k++al+cprC+st tkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rkn+k+s Pav_sc0000138.1_g1050.1.mk 667 KDQALNCPRCNSTTTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNNKRS 727 7899*****************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 943 aa Download sequence
MDPRYPRPFK IHLVSSTDSP EFTDFTQSLT RSRIIALDAE WKPIRTHQPS FPTVSLIQLA 60 CQLSSDSGES DDSVVFLLDL SSIPLPSIWE LLRDAFVSPD ILKLGFRFKQ DLKYLSSTFS 120 SQGCEQGFDK VEPFMDITSI YQHLQHSQPG RKTSKDIKSL ATICKEVLGI SLSKVWLLKT 180 FAMFIRVPTE VPILLCDELQ CSDWSCRPLT EEQKTYAAID AQCLLEIFNV FQAKIIKEGS 240 LIHSPTESTM NLGLKEVLEK LDVCNKIVRM KFHEALDIVR ATTSYIYPNI ATEEGMALRT 300 RPRNTLPMDE FLVRVANKYG EEILLNESDK RARTSKRKSK RRSSVGLICK EKQGQSFEDW 360 QGPPPWDLTL GGDGHPKFLC DVMVEGLAKH LRCVGINAAI PYSKKPEPRA LIEQANREKR 420 VLLTRDAKLL RHDYLIKNQI YRVKNLLKNE QLLEIIETFQ LKICEDQLMS RCTKCNGRFI 480 QKPLTTEEAV EAAKGFQRIP NCLFDKNLEF WQCMDCNQLY WEVGPPKLDQ PRGSSSCRDG 540 EAQNWNAFDA TQGSIPLLPQ VYFTEDETTT SRIKQRVRPK QTSETCLSGR QWNGIVKQHR 600 VTSSRPAAVT VFCRNGSASA SAATATLPHF LQSMDTAHWP QGVGVVKSME DSSSSRPILE 660 RRARPQKDQA LNCPRCNSTT TKFCYYNNYS LSQPRYFCKT CRRYWTEGGS LRNVPVGGGS 720 RKNNKRSNSS SPSTSSAKKV AHDHHNHVTN TPHGNFPQHH ESASQNPKIH FQGQDLNLAY 780 PPTDQEYDQV LPFSIDNKSQ HQLNPSSSTT TSSHHHHLSA MELLKNGIAS RGLASFMPMG 840 VPDHSNNNNI TMFSTGFPMG VQEFKPSHGL SFSLDGFESS GYGCLQGVQE ANNSHARLLF 900 PTDEDLKQQI PSTTTATTEF DQHTRGEGDS GGYWNGMLGG GSW

Sequence ? help Back to Top

Protein Sequence Length: 943 aa Download sequence

MDPRYPRPFK IHLVSSTDSP EFTDFTQSLT RSRIIALDAE WKPIRTHQPS FPTVSLIQLA  60
CQLSSDSGES DDSVVFLLDL SSIPLPSIWE LLRDAFVSPD ILKLGFRFKQ DLKYLSSTFS  120
SQGCEQGFDK VEPFMDITSI YQHLQHSQPG RKTSKDIKSL ATICKEVLGI SLSKVWLLKT  180
FAMFIRVPTE VPILLCDELQ CSDWSCRPLT EEQKTYAAID AQCLLEIFNV FQAKIIKEGS  240
LIHSPTESTM NLGLKEVLEK LDVCNKIVRM KFHEALDIVR ATTSYIYPNI ATEEGMALRT  300
RPRNTLPMDE FLVRVANKYG EEILLNESDK RARTSKRKSK RRSSVGLICK EKQGQSFEDW  360
QGPPPWDLTL GGDGHPKFLC DVMVEGLAKH LRCVGINAAI PYSKKPEPRA LIEQANREKR  420
VLLTRDAKLL RHDYLIKNQI YRVKNLLKNE QLLEIIETFQ LKICEDQLMS RCTKCNGRFI  480
QKPLTTEEAV EAAKGFQRIP NCLFDKNLEF WQCMDCNQLY WEVGPPKLDQ PRGSSSCRDG  540
EAQNWNAFDA TQGSIPLLPQ VYFTEDETTT SRIKQRVRPK QTSETCLSGR QWNGIVKQHR  600
VTSSRPAAVT VFCRNGSASA SAATATLPHF LQSMDTAHWP QGVGVVKSME DSSSSRPILE  660
RRARPQKDQA LNCPRCNSTT TKFCYYNNYS LSQPRYFCKT CRRYWTEGGS LRNVPVGGGS  720
RKNNKRSNSS SPSTSSAKKV AHDHHNHVTN TPHGNFPQHH ESASQNPKIH FQGQDLNLAY  780
PPTDQEYDQV LPFSIDNKSQ HQLNPSSSTT TSSHHHHLSA MELLKNGIAS RGLASFMPMG  840
VPDHSNNNNI TMFSTGFPMG VQEFKPSHGL SFSLDGFESS GYGCLQGVQE ANNSHARLLF  900
PTDEDLKQQI PSTTTATTEF DQHTRGEGDS GGYWNGMLGG GSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	2e-45	Dof family protein