PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000130.1_g440.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 131aa    MW: 14202.5 Da    PI: 10.2229
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000130.1_g440.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.41.1e-192558134
                       GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
                               C+ C+tt+TplWR gp g++tLCnaCG++yrk++
  Pav_sc0000130.1_g440.1.mk 25 CADCHTTTTPLWRGGPAGPRTLCNACGIKYRKRK 58
                               ********************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MDQRQKGSEA EHMNQSSIAP PSKSCADCHT TTTPLWRGGP AGPRTLCNAC GIKYRKRKRA  60
LVGLNKGATG TERRKHKTIG APLKLGLMSM EREMVEVVLH FHKRKLKEEE EAAILLMALS  120
CSSGTGGAVC A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49300.14e-20GATA family protein