PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000129.1_g1460.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 215aa    MW: 23983.3 Da    PI: 4.5924
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000129.1_g1460.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.76e-181867255
                         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                +ykGVr +k +g+Wv+eIr p++   r r++lg++++ae+Aa+a +aa  +l+g
  Pav_sc0000129.1_g1460.1.mk 18 KYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDSAEKAARAFDAALFCLRG 67
                                7*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MVKQQQTIGK PSERNDFKYK GVRKRKWGKW VSEIRLPNSR ERIWLGSYDS AEKAARAFDA  60
ALFCLRGRTA KFNFPDNPPN ISGGRTLSPA EIQAEAARFA NSEPPTTQQH SDQSMSELQT  120
ESQSQSPSPS VSEGSGTVLM DSDFQVTQND SFSDLFRTFG SGNYATEYGL FPGFDELNGQ  180
FFSPATTEPT AAVDYYAEEN LDGVIPAQES FLWNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12026KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-58ERF family protein