PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000124.1_g160.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NZZ/SPL
Protein Properties Length: 355aa    MW: 38087.7 Da    PI: 9.0894
Description NZZ/SPL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000124.1_g160.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NOZZLE20.57.7e-07175182
                     NOZZLE  1 matslffmstdqnsvrnpnellrntrlvvnssgeirte.tkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklv 82
                               mat +++m+++q + ++p + l           e + e tk ++g k   k+++  +k+p  rg+gva+ler ++++  kk++
  Pav_sc0000124.1_g160.1.mk  1 MATPMLLMASEQSTTQDPTKTLV------GFYEESKPEsTKSTKGTKRSGKASN-SKKQP-QRGLGVAQLERLRLQDRWKKMT 75
                               89999*********999987654......4456777884666688888777654.34455.7****************99995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MATPMLLMAS EQSTTQDPTK TLVGFYEESK PESTKSTKGT KRSGKASNSK KQPQRGLGVA  60
QLERLRLQDR WKKMTELPQL QPQPQVVNLP DHHQYQNFQH QNPTRTLPGP LASVPVQYGA  120
SSYNGPLLIK GSGGNGLFGF VGQRVGNGHG FGYVGGNNLV VDLNPSPYAI GAPDPRFEVG  180
AVFETSKELS SIPKVQPLSS DCCDICCKKQ KKRLNSRNYM GLNGRSGKSA ACIPINSSGF  240
LRLNPEAGGG QVVGTHSGYR NDDQGVEVRA VHRKGSSAGG GIFMEYDFFP AAGGKSSEMR  300
GGTCPKEPEM WQTAEASVSV GSHEEPSDIT ASSYGYGIGA DSYHNPVDLS LKLSF