PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000119.1_g160.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 232aa    MW: 26023.8 Da    PI: 5.0702
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000119.1_g160.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.76.2e-1892142255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                 y+GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +++g
  Pav_sc0000119.1_g160.1.mk  92 SYRGVRRRP-WGKFAAEIRDSTR---HgIRVWLGTFDSAEAAALAYDQAAFSMRG 142
                                69*******.**********422...25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MNYSIFHSPI SDLSPESSFG SSFSWDDHKF GNNSLPFNEN DSEEMLLYGL ISNATQEITS  60
RETETLSVSA NPIKEEEVSS TSDSENPKRE KSYRGVRRRP WGKFAAEIRD STRHGIRVWL  120
GTFDSAEAAA LAYDQAAFSM RGSTAILNFP VERVRESLKE INYVASDLDG DSPVVALKRK  180
HSMRRKIGNK KSKVERDVRI ENVVVFEDLG ADYLEELLNS SESTSATATP NR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.15e-65ERF family protein