PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000113.1_g150.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WOX | ||||||||
Protein Properties | Length: 500aa MW: 56938.4 Da PI: 7.1547 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 67.9 | 1.3e-21 | 91 | 151 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+lFe+ n +ps+++++e++++l +++e++V++WFqNrRa+ k+ Pav_sc0000113.1_g150.1.mk 91 RQRWTPTPVQLQILERLFEQgNGTPSKQKIKEITSELsqhgQISETNVYNWFQNRRARSKR 151 89*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 100.3 | 1.4e-32 | 90 | 153 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp Q++iLe+l+++G tP+k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq Pav_sc0000113.1_g150.1.mk 90 ARQRWTPTPVQLQILERLFEQGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKRKQ 153 789***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 500 aa Download sequence |
MMEWEKLQQK EHEMDGQANG NGNGGVLYVK VMTDEQLETL RKQIAVYASI CEQLVEMHKN 60 LTAQQDLAGV RMGNLYCDPL MTSAGHKITA RQRWTPTPVQ LQILERLFEQ GNGTPSKQKI 120 KEITSELSQH GQISETNVYN WFQNRRARSK RKQQNAACNH AESEVETEVD SPKDKKTRPE 180 ELFQSQQNSA QRTEDLCFQS PEISSDLHFL DPQTTKTDKM FPSNSGLRTS RHISEMSFYD 240 EVLSNSRNDL MTGKIEAGNY NLFQQAEDYG MTGSSLVLFE YGDIRSLTLA AEFMVPAEFK 300 WRNEHQMFNA ENPLFGGMVG ASTNSRYKYL HDCKWPREAV DVHHIIVRKS GAKGFFVYFF 360 ALIILATAFY LFLVKEKSVI IVLWSLLLDA FLVKLLRKSV EKESVVVMPA FGVQLETHYV 420 SGKIIRRFVP MDKILKPVLL ECVTPVTCFW SLSFIVHGEA ELVLVFKELR PPMKMLVPIW 480 KALCAATGIK GSSNTSMEDG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 145 | 153 | RRARSKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 7e-94 | WOX family protein |