PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000113.1_g150.1.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WOX
Protein Properties Length: 500aa    MW: 56938.4 Da    PI: 7.1547
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000113.1_g150.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox67.91.3e-2191151257
                                T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                                r+R+t+t+ ql++Le+lFe+ n +ps+++++e++++l    +++e++V++WFqNrRa+ k+
  Pav_sc0000113.1_g150.1.mk  91 RQRWTPTPVQLQILERLFEQgNGTPSKQKIKEITSELsqhgQISETNVYNWFQNRRARSKR 151
                                89*****************99**************************************97 PP

2Wus_type_Homeobox100.31.4e-3290153265
          Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                                ar+RWtPtp Q++iLe+l+++G  tP+k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq
  Pav_sc0000113.1_g150.1.mk  90 ARQRWTPTPVQLQILERLFEQGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKRKQ 153
                                789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    
MMEWEKLQQK EHEMDGQANG NGNGGVLYVK VMTDEQLETL RKQIAVYASI CEQLVEMHKN  60
LTAQQDLAGV RMGNLYCDPL MTSAGHKITA RQRWTPTPVQ LQILERLFEQ GNGTPSKQKI  120
KEITSELSQH GQISETNVYN WFQNRRARSK RKQQNAACNH AESEVETEVD SPKDKKTRPE  180
ELFQSQQNSA QRTEDLCFQS PEISSDLHFL DPQTTKTDKM FPSNSGLRTS RHISEMSFYD  240
EVLSNSRNDL MTGKIEAGNY NLFQQAEDYG MTGSSLVLFE YGDIRSLTLA AEFMVPAEFK  300
WRNEHQMFNA ENPLFGGMVG ASTNSRYKYL HDCKWPREAV DVHHIIVRKS GAKGFFVYFF  360
ALIILATAFY LFLVKEKSVI IVLWSLLLDA FLVKLLRKSV EKESVVVMPA FGVQLETHYV  420
SGKIIRRFVP MDKILKPVLL ECVTPVTCFW SLSFIVHGEA ELVLVFKELR PPMKMLVPIW  480
KALCAATGIK GSSNTSMEDG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1145153RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.17e-94WOX family protein