PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000107.1_g270.1.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family TALE
Protein Properties Length: 291aa    MW: 33059.2 Da    PI: 6.8393
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000107.1_g270.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox23.78.4e-082402732154
                                HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
                   Homeobox  21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                                k +yp+++++++L +++gL+ +q+ +WF N+R +
  Pav_sc0000107.1_g270.1.mk 240 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 273
                                469*****************************87 PP

2ELK25.53e-09194215122
                        ELK   1 ELKhqLlrKYsgyLgsLkqEFs 22 
                                ELK +L++++++++ ++++E++
  Pav_sc0000107.1_g270.1.mk 194 ELKIELKQGFKSRIEDVREEIL 215
                                9*******************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MQESGLGMMG GGGLSSGDGH HEHHNRQLKA EIATHPLYEQ LLSAHVSCLR VATPIDQLPL  60
IDAQLSQSHH LLRSYASQQQ HGHSVSPHER QELDNFLAQY LIVLCSFKEQ LQQHVRVHAV  120
EAVMACREIE SNLQALTGVS LGEGSGATMS DDEDDMQMDF SLDQSGGEGH DMMGFGPLLP  180
TESERSLMER VRQELKIELK QGFKSRIEDV REEILRKRRA GKLPGDTTTV LKNWWQQHSK  240
WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHSNSQ SVTSLKSKRK R
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1271291RKRNWHSNSQSVTSLKSKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62990.11e-171TALE family protein