PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000103.1_g1230.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 206aa MW: 22525.7 Da PI: 8.3973 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 89.5 | 3.2e-28 | 11 | 63 | 3 | 58 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 + +Y+eCl+NhAaslG++a+DGCgEf+ + ++++ +l+CaACgCHRnFHRr + Pav_sc0000103.1_g1230.1.mk 11 NEVYRECLRNHAASLGSYATDGCGEFTLD---DASPGGLQCAACGCHRNFHRRVTY 63 678*************************8...6689*****************875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MEGDHHDQNT NEVYRECLRN HAASLGSYAT DGCGEFTLDD ASPGGLQCAA CGCHRNFHRR 60 VTYAATSSQA AGGSGRSSGH HHHHNRVIMS SSSRGRDPGD NTIATQDQLM DYNAGGGGSP 120 DSGDRMSGKK RFRTKFTAEQ KEKMLAFAEK LGWKLQRKDL EDEIERFCRS IGVSRQVFKV 180 WMHNHKNLSS SSTSASTGNA SSLTTQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14440.1 | 2e-40 | ZF-HD family protein |