PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000099.1_g670.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 81aa    MW: 9249.26 Da    PI: 9.5781
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000099.1_g670.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.11.3e-101558344
                               SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
            Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                               +WT+   +++ +a +++ ++   +W ++ar +g g++++++k ++
  Pav_sc0000099.1_g670.1.br 15 SWTPKQNKQFEKALALYDKDtpdRWQKVARAVG-GKSAEEVKQHY 58
                               7********************************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    
MASNSLTSSR NSNSSWTPKQ NKQFEKALAL YDKDTPDRWQ KVARAVGGKS AEEVKQHYEI  60
LIEDVNHIEA GRVPFPRYRG D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.12e-32MYB_related family protein