PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000095.1_g1620.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

STAT

Protein Properties

Length: 757aa MW: 85170.5 Da PI: 6.3997

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000095.1_g1620.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	190.9	1.4e-59	286	407	1	122
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLf 83 ldvvll+a+++p++k++ev+a L+yad+g++vek++d eapLL+s dGvef+s drp+k+l+G+asfklkisqLsskcdnr+f Pav_sc0000095.1_g1620.1.mk 286 LDVVLLDAFSHPINKELEVIAFLVYADNGAPVEKTSDGEAPLLASQDGVEFASCDRPSKMLHGHASFKLKISQLSSKCDNRMF 368 8******************************************************************************** PP STAT 84 rikfeipklkkypfleavskpirCisrsrntrsssltkk 122 ri+f++p+l++ypfl+a+s pirCisr+r+tr ss+ +k Pav_sc0000095.1_g1620.1.mk 369 RIMFHMPELETYPFLKAFSPPIRCISRNRSTRISSRLWK 407 ******************************9998886 PP

Sequence ? help Back to Top
Protein Sequence Length: 757 aa Download sequence
MARVDCSQIP STPRSTILLP ISSTTGTQHQ QYQPQREGFK VFEKQKQRRN PVEVVEQRLR 60 RRRTMADEEK DSVEDYSPLK DFRAEIEVQE GAFSLCFWLY LMSSTAFPAR LIQVQSGATE 120 GAPFLVLSEK KKMVLLPLGI LHKEAPETCD LTSLSEVPHV AMETEFPMEK WIHIGCEVSS 180 DFVLLHIDGE IAGKKAMSSL FNKDSISNGL TKITLVCGGG DDNSLQGYVH NHKVLPLTSS 240 IMEYYAKDPP LQLSIDNSSA SEIEEGGDGV WSIVGGKASC RRIFSLDVVL LDAFSHPINK 300 ELEVIAFLVY ADNGAPVEKT SDGEAPLLAS QDGVEFASCD RPSKMLHGHA SFKLKISQLS 360 SKCDNRMFRI MFHMPELETY PFLKAFSPPI RCISRNRSTR ISSRLWKRPA SANDQLNLSQ 420 LSGLDDETLE LQHSSIHEEK PSPSSKRCRL GQDDECNSHS RTANQVKNVV RRSDSLEELD 480 DSQTDSESPE ARNSALKSTS SSRNPMSDAT IFKYCLAGLT EKTLLLKEIS STASNEELLS 540 FSHQVSLYSG CSHHRHQIAM AKRLIEEGNK AWNLISQNKQ QVPWESVVFE IEEQFMKIAS 600 CNSRALTQQD FELLRRIAGC QEYLAQENFE KMWCWLYPVA LTLSKDWINT MWSSTSPKWI 660 EGFITKEEAE TSLQGSRGLQ ESGTFVLRFP TSRSWPHPDA GSLVVTYVGS KHTIHNKIIS 720 LDQMFSSAER EKNAKPLQDM LLAEPELSRL GRIIRSR

Sequence ? help Back to Top

Protein Sequence Length: 757 aa Download sequence

MARVDCSQIP STPRSTILLP ISSTTGTQHQ QYQPQREGFK VFEKQKQRRN PVEVVEQRLR  60
RRRTMADEEK DSVEDYSPLK DFRAEIEVQE GAFSLCFWLY LMSSTAFPAR LIQVQSGATE  120
GAPFLVLSEK KKMVLLPLGI LHKEAPETCD LTSLSEVPHV AMETEFPMEK WIHIGCEVSS  180
DFVLLHIDGE IAGKKAMSSL FNKDSISNGL TKITLVCGGG DDNSLQGYVH NHKVLPLTSS  240
IMEYYAKDPP LQLSIDNSSA SEIEEGGDGV WSIVGGKASC RRIFSLDVVL LDAFSHPINK  300
ELEVIAFLVY ADNGAPVEKT SDGEAPLLAS QDGVEFASCD RPSKMLHGHA SFKLKISQLS  360
SKCDNRMFRI MFHMPELETY PFLKAFSPPI RCISRNRSTR ISSRLWKRPA SANDQLNLSQ  420
LSGLDDETLE LQHSSIHEEK PSPSSKRCRL GQDDECNSHS RTANQVKNVV RRSDSLEELD  480
DSQTDSESPE ARNSALKSTS SSRNPMSDAT IFKYCLAGLT EKTLLLKEIS STASNEELLS  540
FSHQVSLYSG CSHHRHQIAM AKRLIEEGNK AWNLISQNKQ QVPWESVVFE IEEQFMKIAS  600
CNSRALTQQD FELLRRIAGC QEYLAQENFE KMWCWLYPVA LTLSKDWINT MWSSTSPKWI  660
EGFITKEEAE TSLQGSRGLQ ESGTFVLRFP TSRSWPHPDA GSLVVTYVGS KHTIHNKIIS  720
LDQMFSSAER EKNAKPLQDM LLAEPELSRL GRIIRSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78540.1	0.0	STAT family protein