PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000093.1_g640.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 106aa    MW: 11943.3 Da    PI: 9.3706
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000093.1_g640.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.47.8e-091054344
                               SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
            Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                               +WT+   +l+ +a +++ ++   +W  +a+ +g ++t++++k ++
  Pav_sc0000093.1_g640.1.mk 10 SWTPKQNKLFERALALYDKDtpeRWQNVAKAVGGNKTAEEVKRHY 54
                               7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MGSLQKHNSS WTPKQNKLFE RALALYDKDT PERWQNVAKA VGGNKTAEEV KRHYDILLED  60
LRQIESGHVP IPNYKSSYGG GGGGRGSSSN INVDEEERLL KYLKLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.17e-35MYB_related family protein